RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Pdp2Q504M2 532 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ndufaf2Q59J78 168 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ugt1a9Q62452 528 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tshz2Q68FE9 1030 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cdk17Q8K0D0 523 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dusp19Q8K4T5 220 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Utp6Q8VCY6 597 aaKnown RBP10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Stx18Q8VDS8 334 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr866Q8VFI7 312 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Apobec3Q99J72 440 aaKnown RBP10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trim33Q99PP7 1142 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nipsnap3bQ9CQE1 247 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Kat2bQ9JHD1 813 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm8237E9Q257 205 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Akap14Q3V0I7 536 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ddx5Q61656 614 aaKnown RBP10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam167aQ6P1G6 215 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Plekha8Q80W71 519 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Prpf39Q8K2Z2 665 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tbrg4Q91YM4 630 aaKnown RBP10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Chmp1b1Q99LU0 199 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mettl16Q9CQG2 553 aaKnown RBP10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 BcamQ9R069 622 aa10.19□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm4869A0A1B0GSG7 984 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Zfp882E9Q4R4 555 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 R3hdm1E9Q9Q2 1135 aaKnown RBP10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 CamkvQ3UHL1 512 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam198aQ3UY90 562 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Celf6Q7TN33 460 aaKnown RBP10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 1700001J03RikQ80ZR8 219 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 4921511C20RikQ8BVT7 469 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Clptm1Q8VBZ3 664 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slc44a4Q91VA1 707 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm32742A0A1B0GT42 1604 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rhox3cA2AWM0 215 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rhox3hL7MU37 215 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ccna2P51943 422 aaKnown RBP10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 ThraP63058 492 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Smyd5Q3TYX3 416 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tgfbrap1Q3UR70 860 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Plcl1Q3USB7 1096 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rhox3aQ4TU90 215 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Exoc3l4Q6DIA2 721 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Phf21aQ6ZPK0 659 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cpne3Q8BT60 533 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slc47a1Q8K0H1 567 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam151aQ8QZW3 608 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Prg3Q9JL95 222 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tlr5Q9JLF7 859 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trim10Q9WUH5 489 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm1141B9EJU1 475 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gcnt4E9Q649 455 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 AurkbO70126 345 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nr3c1P06537 783 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 PtprcP06800 1291 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Galnt3P70419 633 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Coq7P97478 217 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Krt72Q6IME9 520 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ntrk3Q6VNS1 825 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 TbcelQ8C5W3 424 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bbs2Q9CWF6 721 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Serpina1fQ9DCQ7 411 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Map3k20Q9ESL4 802 aaKnown RBP10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Psmc3O88685 442 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ptpn5P54830 541 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gp1bbP56400 206 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tll1Q62381 1013 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 RetsatQ64FW2 609 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr392Q7TRX6 312 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Disc1Q811T9 852 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Pi4kbQ8BKC8 816 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 AopepQ8BXQ6 817 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Eif2b5Q8CHW4 717 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr615Q8VGY4 313 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Q9CYI0 393 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Erich1E9PY43 332 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fgl2P12804 432 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Irf8P23611 424 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 TfamP40630 243 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cd86P42082 309 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sephs2P97364 452 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 CapslQ6P8Y1 208 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Chtf18Q8BIW9 969 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam180aQ8BR21 173 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gprc5cQ8K3J9 440 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 4930519G04RikQ9CPT7 205 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Txndc12Q9CQU0 170 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mapk13Q9Z1B7 366 aa10.18□□□□□ -0.78
Syne1-201ENSMUST00000041639 Hecw1Q8K4P8 1604 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cylc2B1AWN8 422 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Fam47eD3YWC7 402 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Srsf11E9Q6E5 511 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Scd1P13516 355 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Krt6aP50446 553 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Abi2P62484 446 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Syce1lQ5D525 247 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm5414Q6IFZ8 552 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Drd5Q8BLD9 478 aa10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 H2afy2Q8CCK0 372 aaKnown RBP10.17□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ccdc63Q8CDV6 558 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms