RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 RxrgP28705 463 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ccnd2P30280 289 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ccndbp1Q3TVC7 356 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 FancbQ5XJY6 703 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Senp6Q6P7W0 1132 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fam151aQ8QZW3 608 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fis1Q9CQ92 152 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cdc40Q9DC48 579 aaKnown RBP14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 RereQ80TZ9 1558 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 P01734 135 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ms4a2P20490 235 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nedd8P29595 81 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Esrp1Q3US41 680 aaKnown RBP14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sel1l3Q80TS8 1137 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Bsdc1Q80Y55 427 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mta3Q924K8 591 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 CalcbQ99MP3 130 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ddx56Q9D0R4 546 aaKnown RBP14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tmem47Q9JJG6 181 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Trpv2Q9WTR1 756 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tle6Q9WVB3 581 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 RaraP11416 462 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 BC051142Q3V0M8 400 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm13084A2A8N0 494 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 CidebO70303 219 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mxi1P50540 228 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Lins1Q3U1D0 764 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 CtsfQ9R013 462 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tnrc6bQ8BKI2 1810 aaKnown RBP14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tlr8P58682 1032 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 StamP70297 548 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tmem270Q6UJB9 264 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tmem117Q8BH18 514 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nox1Q8CIZ9 591 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Znf654Q9DAU9 571 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Myh8P13542 1937 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ttll10A4Q9F3 704 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sema4dO09126 861 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pdha2P35487 391 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pramel6Q810Y9 485 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Arhgap22Q8BL80 702 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Prdm8Q8BZ97 687 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Rhobtb3Q9CTN4 611 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Lrrc38A2VDH3 298 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ppef2O35385 757 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Htr3aP23979 487 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nutm2Q3V0C3 733 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Lcp1Q61233 627 aaKnown RBP14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pdk1Q8BFP9 434 aaKnown RBP14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Prr33Q8C494 260 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ppp6r2Q8R3Q2 923 aa14.42□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm21964A0A1W2P7S4 437 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mocs3A2BDX3 460 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pnldc1B2RXZ1 531 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Slc4a5E9Q3M5 1116 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mapk1P63085 358 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pik3r5Q5SW28 871 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ccdc32Q8BS39 179 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mlc1Q8VHK5 382 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Atp13a1Q9EPE9 1200 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pus3Q9JI38 481 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm1758F6VZZ1 202 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 CratP47934 626 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ag2Q3UPL5 249 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mks1Q5SW45 561 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Lonrf1D3YY23 762 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Rbm20Q3UQS8 1199 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ppp4r3cQ3V0Y1 813 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Disc1Q811T9 852 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pnma3Q8JZW8 466 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Golph3lQ8R088 285 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sh3kbp1Q8R550 709 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Olfr1414Q8VGU5 312 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tlr9Q9EQU3 1032 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 IcoslgQ9JHJ8 322 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Stk4Q9JI11 487 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Acsl4Q9QUJ7 711 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sh2d3cQ9QZS8 854 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Dlc1Q9R0Z9 1092 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gabbr1Q9WV18 960 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Rad21l1A2AU37 552 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 GpiP06745 558 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 SnrpfP62307 86 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Aqp1Q02013 269 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ice1E9Q286 2241 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 InvsO89019 1062 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Crabp2P22935 138 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Aldh3a2P47740 484 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Lad1P57016 528 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tbx1P70323 479 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nudt18Q3U2V3 323 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Thrap3Q569Z6 951 aaKnown RBP14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 4921511C20RikQ8BVT7 469 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pdk2Q9JK42 407 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Atp8b4A2ANX3 1194 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Serpina16D3Z660 418 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Spin2fJ3QPU0 254 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sult1e1P49891 295 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ptprn2P80560 1001 aa14.41□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sephs2P97364 452 aa14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms