RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gm12394A2AKP6 982 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ssxb9A2BI93 185 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Neurog2P70447 263 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 DselQ0VBN2 1207 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Foxn1Q61575 648 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Wdr35Q8BND3 1181 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 C8aQ8K182 587 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Otud7aQ8R554 926 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pglyrp2Q8VCS0 530 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 St13Q99L47 371 aaKnown RBP16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ankef1Q9D2J7 775 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Slc15a2Q9ES07 729 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Adamtsl1Q8BLI0 1745 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Psme4Q5SSW2 1843 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Skint3A7TZF0 458 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Mmp10O55123 476 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Il3P01586 166 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Krt13P08730 437 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Lipo3Q3UT41 399 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kctd12Q6WVG3 327 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Tdpoz2Q717B2 364 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rnf168Q80XJ2 565 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Gbp9Q8BTS3 619 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 PygbQ8CI94 843 aaKnown RBP16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Trpv6Q91WD2 767 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Nupr1Q9WTK0 80 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Speer3W4VSP1 261 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Myo5aQ99104 1853 aaKnown RBP16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Clca3bE9PUL3 1044 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 2010300C02RikE9Q3M9 1175 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ptk2P34152 1090 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Rab6bP61294 208 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Nt5dc3Q3UHB1 546 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Hbs1lQ69ZS7 682 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 RimklbQ80WS1 387 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Q9D1Z2 194 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Toe1Q9D2E2 511 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Psmg1Q9JK23 289 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ripk3Q9QZL0 486 aa16.91■□□□□ 0.3
Trim28-201ENSMUST00000005705 Adgrf2E9Q4J9 644 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 CidebO70303 219 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Irf8P23611 424 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ag2Q3UPL5 249 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Znf507Q6ZPY5 941 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Btbd10Q80X66 475 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Nipa1Q8BHK1 323 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Dhx32Q8BZS9 744 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Adgrg2Q8CJ12 1009 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Stau2Q8CJ67 570 aaKnown RBP16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Alg9Q8VDI9 611 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Caap1Q8VDY9 356 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Pcdha2Q91Y17 948 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ccdc22Q9JIG7 627 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 PodxlQ9R0M4 503 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Ppp1r36D3Z0R2 411 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Elk3P41971 409 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Eif3eP60229 445 aaKnown RBP16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Apba2P98084 750 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Kcnc2Q14B80 642 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Stip1Q60864 543 aaKnown RBP16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 PterQ60866 349 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Usp6nlQ80XC3 819 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Wdtc1Q80ZK9 677 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Phactr3Q8BYK5 558 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Npm3Q9CPP0 175 aaKnown RBP16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 Dgcr8Q9EQM6 773 aa16.9■□□□□ 0.3
Trim28-201ENSMUST00000005705 2210011C24RikA0A087WQ89 206 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rpl22P67984 128 aaKnown RBP16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Otud5Q3U2S4 566 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dpysl3Q62188 570 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tgoln2Q62314 363 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ndrg1Q62433 394 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 GlmnQ8BZM1 596 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gpc5Q8CAL5 572 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Sh2d5Q8JZW5 429 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rbp7Q9EPC5 134 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cyp2t4E9PWV0 503 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cdr1E9Q0B4 517 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Foxp2P58463 714 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Arl4cP61208 192 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mea1Q64327 174 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Acot5Q6Q2Z6 421 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Kcnk18Q6VV64 394 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr1505Q7TQQ2 316 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Azin2Q8BVM4 459 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Arhgap24Q8C4V1 747 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cog3Q8CI04 820 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ssh3Q8K330 649 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Sgsm3Q8VCZ6 750 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ppil2Q9D787 521 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Slc12a4Q9JIS8 1085 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cacng4Q9JJV4 327 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tubb1A2AQ07 451 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gm3371F7CQW8 167 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Anxa8O35640 327 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ttc39dQ0VF76 604 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gm4952Q5FW57 296 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ripor1Q68FE6 1223 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 PdgfcQ8CI19 345 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms