RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ppp2r1bQ7TNP2 601 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pdzph1Q8BGR1 1238 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tarsl2Q8BLY2 790 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Aldh5a1Q8BWF0 523 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccdc63Q8CDV6 558 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ifi205aQ8CGE8 404 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vps11Q91W86 941 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Depdc7Q91WS7 511 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Smim11aQ99J19 55 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp3a44Q9EQW4 504 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Foxo4Q9WVH3 505 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lamc1P02468 1607 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc4a5E9Q3M5 1116 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mpp3O88910 568 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 TxnP10639 105 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ass1P16460 412 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp2c37P56654 490 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ppp4cP97470 307 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Psd3Q2PFD7 1037 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 MyrfQ3UR85 1138 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Adam2Q60718 735 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pde1aQ61481 565 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Plk4Q64702 925 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Smarca1Q6PGB8 1046 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zdhhc17Q80TN5 632 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nim1kQ8BHI9 436 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Q8CC96 669 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gtse1Q8R080 741 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pde2aQ922S4 916 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pcyox1Q9CQF9 505 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam45aQ9D8N2 357 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dmap1Q9JI44 468 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rps12P63323 132 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Kcna4Q61423 654 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nlrp4bQ8C6J9 863 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ces4aQ8R0W5 563 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pglyrp2Q8VCS0 530 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Serpina3nQ91WP6 418 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chst15Q91XQ5 561 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Stk33Q924X7 491 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mcrs1Q99L90 462 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm28036V9GXJ1 658 aa9.48□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 CraddO88843 199 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SarsP26638 512 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fmr1P35922 614 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Shmt1P50431 478 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Krt6aP50446 553 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rpl10aP53026 217 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mmp20P57748 482 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mcm9Q2KHI9 1134 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rnpc3Q3UZ01 514 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Afg1lQ3V384 480 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lrrc8bQ5DU41 803 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tspyl5Q69ZB3 406 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chsy1Q6ZQ11 800 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cand2Q6ZQ73 1235 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccdc59Q8R2N0 240 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slf1Q8R3P9 1054 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ppp1r16bQ8VHQ3 568 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mrfap1Q9CQL7 125 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp804bA0A0G2JGH6 1343 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3252E9PUT9 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm2956E9PVJ0 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3002E9PW72 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3468E9QAJ8 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8108K7N734 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3739L7N296 216 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vmn2r77L7N2B7 854 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3164L7N2B9 238 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm3488M0QW81 238 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 H2afxP27661 143 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Man1a2P39098 641 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 AdssP46664 456 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Shcbp1lQ3TTP0 639 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Krt76Q3UV17 594 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 C1orf109Q499E6 217 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rnf139Q7TMV1 668 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gpr141Q7TQP0 305 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Znf879Q8BI99 563 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp1Q8BJQ2 784 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmtc3Q8BRH0 920 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Proser2Q8C5R2 471 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rps6kl1Q8R2S1 544 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sgms1Q8VCQ6 419 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 NlnQ91YP2 704 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ndufb9Q9CQJ8 179 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pgm3Q9CYR6 542 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Aff4Q9ESC8 1160 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Orc6Q9WUJ8 262 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arih2Q9Z1K6 492 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm29276A0A087WNW5 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21117A0A087WPJ9 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm20820A0A087WPP3 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm20937A0A087WQA3 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21258A0A087WQC7 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm28102A0A087WQL3 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21095A0A087WR14 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm20792A0A087WRF5 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21865A0A087WRL2 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm28576A0A087WRP6 222 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms