RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A RPL23BP0CX42 137 aaKnown RBP11.61□□□□□ -0.55
TRN1tP(UGG)A BRP1P53194 125 aa11.61□□□□□ -0.55
TRN1tP(UGG)A DXO1Q06349 442 aa11.61□□□□□ -0.55
TRN1tP(UGG)A YPR053CQ6Q5F3 151 aa11.61□□□□□ -0.55
TRN1tP(UGG)A SUR2P38992 349 aa11.6□□□□□ -0.55
TRN1tP(UGG)A RPS22BQ3E7Y3 130 aaKnown RBP11.6□□□□□ -0.55
TRN1tP(UGG)A YCR024C-BQ3E7Z8 88 aa11.6□□□□□ -0.55
TRN1tP(UGG)A FRS1P15624 595 aaKnown RBP11.59□□□□□ -0.55
TRN1tP(UGG)A RRT13P40042 185 aa11.59□□□□□ -0.55
TRN1tP(UGG)A AIM34Q03673 198 aa11.58□□□□□ -0.56
TRN1tP(UGG)A FSF1Q12029 327 aaKnown RBP11.58□□□□□ -0.56
TRN1tP(UGG)A SEC4P07560 215 aaKnown RBP11.57□□□□□ -0.56
TRN1tP(UGG)A WIP1Q2V2P8 89 aa11.57□□□□□ -0.56
TRN1tP(UGG)A YCR075W-AQ3E830 75 aa11.57□□□□□ -0.56
TRN1tP(UGG)A ELF1P36053 145 aa11.56□□□□□ -0.56
TRN1tP(UGG)A SDH8P38345 138 aa11.56□□□□□ -0.56
TRN1tP(UGG)A YPS5P53057 165 aa11.56□□□□□ -0.56
TRN1tP(UGG)A MRPL33P20084 86 aa11.55□□□□□ -0.56
TRN1tP(UGG)A YCH1P42937 148 aa11.55□□□□□ -0.56
TRN1tP(UGG)A CYT2Q00873 224 aa11.55□□□□□ -0.56
TRN1tP(UGG)A YGR149WP48236 432 aa11.54□□□□□ -0.56
TRN1tP(UGG)A SGF11Q03067 99 aa11.53□□□□□ -0.56
TRN1tP(UGG)A TVP18Q04767 167 aa11.53□□□□□ -0.56
TRN1tP(UGG)A YLR042CQ07990 161 aa11.53□□□□□ -0.56
TRN1tP(UGG)A VAM10Q08474 114 aa11.53□□□□□ -0.56
TRN1tP(UGG)A YBR126W-AQ8TGU7 68 aa11.53□□□□□ -0.56
TRN1tP(UGG)A YKR032WP36127 104 aa11.52□□□□□ -0.57
TRN1tP(UGG)A ARL3Q02804 198 aa11.52□□□□□ -0.57
TRN1tP(UGG)A RPS8AP0CX39 200 aaKnown RBP11.51□□□□□ -0.57
TRN1tP(UGG)A RPS8BP0CX40 200 aaKnown RBP11.51□□□□□ -0.57
TRN1tP(UGG)A MRPL28P36527 147 aa11.5□□□□□ -0.57
TRN1tP(UGG)A YNL217WP40152 326 aa11.49□□□□□ -0.57
TRN1tP(UGG)A HAL1Q01766 294 aa11.49□□□□□ -0.57
TRN1tP(UGG)A PET8P38921 284 aa11.48□□□□□ -0.57
TRN1tP(UGG)A YCR023CP25351 611 aa11.46□□□□□ -0.57
TRN1tP(UGG)A KTI12P34253 313 aaKnown RBP11.46□□□□□ -0.57
TRN1tP(UGG)A SEC72P39742 193 aaKnown RBP11.46□□□□□ -0.57
TRN1tP(UGG)A RPL42AP0CX27 106 aaKnown RBP11.45□□□□□ -0.58
TRN1tP(UGG)A RPL42BP0CX28 106 aaKnown RBP11.45□□□□□ -0.58
TRN1tP(UGG)A KRE9P39005 276 aa11.45□□□□□ -0.58
TRN1tP(UGG)A ATP16Q12165 160 aa11.45□□□□□ -0.58
TRN1tP(UGG)A DGA1Q08650 418 aa11.44□□□□□ -0.58
TRN1tP(UGG)A TEM1P38987 245 aa11.42□□□□□ -0.58
TRN1tP(UGG)A YGR240C-AQ3E786 66 aa11.42□□□□□ -0.58
TRN1tP(UGG)A SAL1D6W196 494 aa11.41□□□□□ -0.58
TRN1tP(UGG)A YPT53P36019 220 aa11.41□□□□□ -0.58
TRN1tP(UGG)A YGL118CP53132 145 aa11.41□□□□□ -0.58
TRN1tP(UGG)A YNL200CP40165 246 aaKnown RBP11.4□□□□□ -0.58
TRN1tP(UGG)A YPR014CQ6B0W2 109 aa11.4□□□□□ -0.58
TRN1tP(UGG)A YER076CP40049 302 aa11.39□□□□□ -0.59
TRN1tP(UGG)A GSP1P32835 219 aaKnown RBP11.38□□□□□ -0.59
TRN1tP(UGG)A GSP2P32836 220 aaKnown RBP11.38□□□□□ -0.59
TRN1tP(UGG)A DCV1P43595 202 aa11.38□□□□□ -0.59
TRN1tP(UGG)A ATP23P53722 227 aa11.38□□□□□ -0.59
TRN1tP(UGG)A SSS1P35179 80 aa11.37□□□□□ -0.59
TRN1tP(UGG)A YER134CP40081 178 aa11.37□□□□□ -0.59
TRN1tP(UGG)A YIL014C-AQ02598 104 aa11.37□□□□□ -0.59
TRN1tP(UGG)A CRC1Q12289 327 aa11.36□□□□□ -0.59
TRN1tP(UGG)A MGR2Q02889 113 aa11.35□□□□□ -0.59
TRN1tP(UGG)A MED7Q08278 222 aa11.35□□□□□ -0.59
TRN1tP(UGG)A PFY1P07274 126 aa11.34□□□□□ -0.59
TRN1tP(UGG)A GLO1P50107 326 aa11.34□□□□□ -0.59
TRN1tP(UGG)A PMP3P87284 55 aa11.34□□□□□ -0.59
TRN1tP(UGG)A CDC40P40968 455 aaPredicted RBP11.33□□□□□ -0.6
TRN1tP(UGG)A CUE4Q04201 117 aaPredicted RBP11.33□□□□□ -0.6
TRN1tP(UGG)A PRE1P22141 198 aaKnown RBP11.32□□□□□ -0.6
TRN1tP(UGG)A AQY1P0CD91 305 aa11.31□□□□□ -0.6
TRN1tP(UGG)A UBC5P15732 148 aa11.3□□□□□ -0.6
TRN1tP(UGG)A YKR070WP36151 352 aaKnown RBP11.3□□□□□ -0.6
TRN1tP(UGG)A SEN15Q04675 128 aa11.3□□□□□ -0.6
TRN1tP(UGG)A CMC2Q3E7A4 109 aa11.3□□□□□ -0.6
TRN1tP(UGG)A YGL015CP33199 130 aa11.29□□□□□ -0.6
TRN1tP(UGG)A OST3P48439 350 aa11.29□□□□□ -0.6
TRN1tP(UGG)A PCL2P25693 308 aa11.28□□□□□ -0.6
TRN1tP(UGG)A FCF1Q05498 189 aaPredicted RBP11.28□□□□□ -0.6
TRN1tP(UGG)A ERG27Q12452 347 aaKnown RBP11.27□□□□□ -0.61
TRN1tP(UGG)A YBR209WP38311 105 aa11.26□□□□□ -0.61
TRN1tP(UGG)A RPR2P40571 144 aa11.26□□□□□ -0.61
TRN1tP(UGG)A TOS6P48560 102 aa11.25□□□□□ -0.61
TRN1tP(UGG)A ERV14P53173 138 aa11.25□□□□□ -0.61
TRN1tP(UGG)A RPL16AP26784 199 aaKnown RBP11.24□□□□□ -0.61
TRN1tP(UGG)A MRPL11P36521 249 aaPredicted RBP11.24□□□□□ -0.61
TRN1tP(UGG)A ARC15P40518 154 aaRIP-Chip data11.24□□□□□ -0.61not detected
TRN1tP(UGG)A YIL059CP40520 121 aa11.24□□□□□ -0.61
TRN1tP(UGG)A YJL028WP47062 111 aa11.24□□□□□ -0.61
TRN1tP(UGG)A YGL088WP53151 121 aa11.24□□□□□ -0.61
TRN1tP(UGG)A POP3P53833 195 aaPredicted RBP11.24□□□□□ -0.61
TRN1tP(UGG)A DPP1Q05521 289 aa11.24□□□□□ -0.61
TRN1tP(UGG)A YIL134C-AQ45U18 67 aa11.24□□□□□ -0.61
TRN1tP(UGG)A HTL1Q9URQ5 78 aa11.24□□□□□ -0.61
TRN1tP(UGG)A ERI1P62651 68 aaKnown RBP11.23□□□□□ -0.61
TRN1tP(UGG)A SPC1P46965 94 aa11.22□□□□□ -0.61
TRN1tP(UGG)A YJR146WP47174 117 aa11.22□□□□□ -0.61
TRN1tP(UGG)A YOR008C-AQ3E7B9 74 aa11.22□□□□□ -0.61
TRN1tP(UGG)A YMR122W-AQ3E842 84 aa11.22□□□□□ -0.61
TRN1tP(UGG)A HMRA2P0CY13 119 aa11.21□□□□□ -0.61
TRN1tP(UGG)A MRP49P32388 137 aa11.21□□□□□ -0.61
TRN1tP(UGG)A ADH2P00331 348 aaKnown RBP11.2□□□□□ -0.62
TRN1tP(UGG)A AIM29P36154 155 aa11.2□□□□□ -0.62
TRN1tP(UGG)A YDR042CQ03205 200 aa11.2□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms