RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C GPI19Q04082 140 aa5.78□□□□□ -1.48
LSP1YPL004C SUR2P38992 349 aa5.77□□□□□ -1.49
LSP1YPL004C KRE9P39005 276 aa5.77□□□□□ -1.49
LSP1YPL004C THG1P53215 237 aaKnown RBP5.77□□□□□ -1.49
LSP1YPL004C FRS1P15624 595 aaKnown RBP5.76□□□□□ -1.49
LSP1YPL004C YCR023CP25351 611 aa5.76□□□□□ -1.49
LSP1YPL004C ZRT1P32804 376 aa5.76□□□□□ -1.49
LSP1YPL004C PAM17P36147 197 aa5.76□□□□□ -1.49
LSP1YPL004C YLR042CQ07990 161 aa5.76□□□□□ -1.49
LSP1YPL004C SNU23Q12368 194 aaPredicted RBP5.76□□□□□ -1.49
LSP1YPL004C DAD2P36162 133 aa5.75□□□□□ -1.49
LSP1YPL004C YNL217WP40152 326 aa5.75□□□□□ -1.49
LSP1YPL004C YGR017WP53210 297 aa5.75□□□□□ -1.49
LSP1YPL004C HHO1P53551 258 aa5.75□□□□□ -1.49
LSP1YPL004C POM33Q12164 279 aa5.75□□□□□ -1.49
LSP1YPL004C IRC22P40006 225 aa5.74□□□□□ -1.49
LSP1YPL004C ATP23P53722 227 aa5.74□□□□□ -1.49
LSP1YPL004C GTO3Q04806 366 aa5.74□□□□□ -1.49
LSP1YPL004C CRC1Q12289 327 aa5.74□□□□□ -1.49
LSP1YPL004C TVP18Q04767 167 aa5.73□□□□□ -1.49
LSP1YPL004C DXO1Q06349 442 aa5.73□□□□□ -1.49
LSP1YPL004C PAU19P0CE85 124 aa5.72□□□□□ -1.49
LSP1YPL004C PAU21P0CE86 164 aa5.72□□□□□ -1.49
LSP1YPL004C PAU22P0CE87 164 aa5.72□□□□□ -1.49
LSP1YPL004C PAU3P25610 124 aa5.72□□□□□ -1.49
LSP1YPL004C YBR013CP38215 129 aa5.72□□□□□ -1.49
LSP1YPL004C DGA1Q08650 418 aa5.72□□□□□ -1.49
LSP1YPL004C RPL42AP0CX27 106 aaKnown RBP5.71□□□□□ -1.5
LSP1YPL004C RPL42BP0CX28 106 aaKnown RBP5.71□□□□□ -1.5
LSP1YPL004C MRPL33P20084 86 aa5.71□□□□□ -1.5
LSP1YPL004C SDH8P38345 138 aa5.71□□□□□ -1.5
LSP1YPL004C TEM1P38987 245 aa5.71□□□□□ -1.5
LSP1YPL004C CDC40P40968 455 aaPredicted RBP5.71□□□□□ -1.5
LSP1YPL004C SPC1P46965 94 aa5.71□□□□□ -1.5
LSP1YPL004C YGR149WP48236 432 aa5.71□□□□□ -1.5
LSP1YPL004C SDS23P53172 527 aa5.71□□□□□ -1.5
LSP1YPL004C ZEO1Q08245 113 aa5.71□□□□□ -1.5
LSP1YPL004C RPL23AP0CX41 137 aaKnown RBP5.7□□□□□ -1.5
LSP1YPL004C RPL23BP0CX42 137 aaKnown RBP5.7□□□□□ -1.5
LSP1YPL004C UBC5P15732 148 aa5.69□□□□□ -1.5
LSP1YPL004C KTI12P34253 313 aaKnown RBP5.69□□□□□ -1.5
LSP1YPL004C YKR032WP36127 104 aa5.69□□□□□ -1.5
LSP1YPL004C NSE4P43124 402 aa5.69□□□□□ -1.5
LSP1YPL004C FSF1Q12029 327 aaKnown RBP5.69□□□□□ -1.5
LSP1YPL004C RPS22BQ3E7Y3 130 aaKnown RBP5.69□□□□□ -1.5
LSP1YPL004C YPT53P36019 220 aa5.68□□□□□ -1.5
LSP1YPL004C PMP3P87284 55 aa5.68□□□□□ -1.5
LSP1YPL004C YCR024C-BQ3E7Z8 88 aa5.68□□□□□ -1.5
LSP1YPL004C POR1P04840 283 aaKnown RBP5.67□□□□□ -1.5
LSP1YPL004C GTT1P40582 234 aa5.67□□□□□ -1.5
LSP1YPL004C ERI1P62651 68 aaKnown RBP5.67□□□□□ -1.5
LSP1YPL004C DPP1Q05521 289 aa5.67□□□□□ -1.5
LSP1YPL004C YLL066W-BQ8TGJ7 56 aa5.67□□□□□ -1.5
LSP1YPL004C PET8P38921 284 aa5.66□□□□□ -1.5
LSP1YPL004C DCV1P43595 202 aa5.66□□□□□ -1.5
LSP1YPL004C YMR122W-AQ3E842 84 aa5.66□□□□□ -1.5
LSP1YPL004C SAL1D6W196 494 aa5.65□□□□□ -1.5
LSP1YPL004C SEC4P07560 215 aaKnown RBP5.65□□□□□ -1.5
LSP1YPL004C MRP49P32388 137 aa5.65□□□□□ -1.5
LSP1YPL004C RPL33AP05744 107 aaKnown RBP5.64□□□□□ -1.51
LSP1YPL004C RPL33BP41056 107 aaKnown RBP5.64□□□□□ -1.51
LSP1YPL004C YJL028WP47062 111 aa5.64□□□□□ -1.51
LSP1YPL004C MGR2Q02889 113 aa5.64□□□□□ -1.51
LSP1YPL004C WIP1Q2V2P8 89 aa5.64□□□□□ -1.51
LSP1YPL004C PFY1P07274 126 aa5.63□□□□□ -1.51
LSP1YPL004C YKR070WP36151 352 aaKnown RBP5.63□□□□□ -1.51
LSP1YPL004C GLO1P50107 326 aa5.63□□□□□ -1.51
LSP1YPL004C PBA1Q05778 276 aa5.63□□□□□ -1.51
LSP1YPL004C RTC6O14464 93 aa5.62□□□□□ -1.51
LSP1YPL004C ARC15P40518 154 aaRIP-Chip data5.62□□□□□ -1.51not detected
LSP1YPL004C YNL200CP40165 246 aaKnown RBP5.61□□□□□ -1.51
LSP1YPL004C CYT2Q00873 224 aa5.61□□□□□ -1.51
LSP1YPL004C YIL014C-AQ02598 104 aa5.61□□□□□ -1.51
LSP1YPL004C YPR195CQ06594 109 aa5.61□□□□□ -1.51
LSP1YPL004C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
LSP1YPL004C YPR010C-AA5Z2X5 72 aa5.6□□□□□ -1.51
LSP1YPL004C YER076CP40049 302 aa5.6□□□□□ -1.51
LSP1YPL004C FCF1Q05498 189 aaPredicted RBP5.6□□□□□ -1.51
LSP1YPL004C TOS6P48560 102 aa5.59□□□□□ -1.51
LSP1YPL004C YGL118CP53132 145 aa5.59□□□□□ -1.51
LSP1YPL004C YDR115WQ04598 105 aa5.59□□□□□ -1.51
LSP1YPL004C ERG27Q12452 347 aaKnown RBP5.59□□□□□ -1.51
LSP1YPL004C AQY1P0CD91 305 aa5.58□□□□□ -1.52
LSP1YPL004C RPL16AP26784 199 aaKnown RBP5.58□□□□□ -1.52
LSP1YPL004C ERG28P40030 148 aa5.58□□□□□ -1.52
LSP1YPL004C YJR146WP47174 117 aa5.58□□□□□ -1.52
LSP1YPL004C YML108WQ03759 105 aa5.58□□□□□ -1.52
LSP1YPL004C MED7Q08278 222 aa5.58□□□□□ -1.52
LSP1YPL004C YPR014CQ6B0W2 109 aa5.58□□□□□ -1.52
LSP1YPL004C TRP1P00912 224 aa5.57□□□□□ -1.52
LSP1YPL004C RPL11AP0C0W9 174 aaKnown RBP5.57□□□□□ -1.52
LSP1YPL004C PRE1P22141 198 aaKnown RBP5.57□□□□□ -1.52
LSP1YPL004C SEC72P39742 193 aaKnown RBP5.57□□□□□ -1.52
LSP1YPL004C GAT4P40569 121 aa5.57□□□□□ -1.52
LSP1YPL004C YMR320WQ04897 101 aa5.57□□□□□ -1.52
LSP1YPL004C RPL11BQ3E757 174 aaPredicted RBP5.57□□□□□ -1.52
LSP1YPL004C YOR008C-AQ3E7B9 74 aa5.57□□□□□ -1.52
LSP1YPL004C DIF1O13577 133 aa5.56□□□□□ -1.52
LSP1YPL004C YBR209WP38311 105 aa5.56□□□□□ -1.52
LSP1YPL004C YIL059CP40520 121 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms