RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W SNF11P38956 169 aa0.71□□□□□ -2.3
SWM2YNR004W SFT1P43682 97 aa0.71□□□□□ -2.3
SWM2YNR004W VPS55P47111 140 aa0.71□□□□□ -2.3
SWM2YNR004W AIM11P87275 137 aa0.71□□□□□ -2.3
SWM2YNR004W YIL014C-AQ02598 104 aa0.71□□□□□ -2.3
SWM2YNR004W YLR194CQ05777 254 aa0.71□□□□□ -2.3
SWM2YNR004W YEA6P39953 335 aa0.7□□□□□ -2.3
SWM2YNR004W TIM8P57744 87 aa0.7□□□□□ -2.3
SWM2YNR004W SPC24Q04477 213 aa0.7□□□□□ -2.3
SWM2YNR004W YLR363W-AQ3E747 85 aa0.7□□□□□ -2.3
SWM2YNR004W YGR240C-AQ3E786 66 aa0.7□□□□□ -2.3
SWM2YNR004W RAD50P12753 1312 aa0.69□□□□□ -2.3
SWM2YNR004W UBR1P19812 1950 aa0.69□□□□□ -2.3
SWM2YNR004W RPB11P38902 120 aa0.69□□□□□ -2.3
SWM2YNR004W TDA2P40045 126 aa0.69□□□□□ -2.3
SWM2YNR004W CYB5P40312 120 aa0.69□□□□□ -2.3
SWM2YNR004W PRP8P33334 2413 aaKnown RBP0.68□□□□□ -2.3
SWM2YNR004W APS2Q00381 147 aa0.67□□□□□ -2.3
SWM2YNR004W GAT4P40569 121 aa0.66□□□□□ -2.3
SWM2YNR004W RPS29BP41058 56 aaKnown RBP0.66□□□□□ -2.3
SWM2YNR004W RPL22BP56628 122 aaKnown RBP0.66□□□□□ -2.3
SWM2YNR004W YPL261CQ08976 102 aa0.66□□□□□ -2.3
SWM2YNR004W DAD1Q12248 94 aa0.66□□□□□ -2.3
SWM2YNR004W OST5Q92316 86 aa0.66□□□□□ -2.3
SWM2YNR004W YCR099CP25657 155 aa0.65□□□□□ -2.31
SWM2YNR004W YLR285C-AQ3E771 56 aa0.65□□□□□ -2.31
SWM2YNR004W YJL197C-AP0C5P0 93 aa0.64□□□□□ -2.31
SWM2YNR004W YFR035CP43608 114 aa0.64□□□□□ -2.31
SWM2YNR004W SNN1P48232 102 aa0.64□□□□□ -2.31
SWM2YNR004W YDR010CQ12426 110 aa0.64□□□□□ -2.31
SWM2YNR004W YBR072C-AQ3E794 53 aa0.64□□□□□ -2.31
SWM2YNR004W PCC1Q3E833 88 aa0.64□□□□□ -2.31
SWM2YNR004W TRM732Q03496 1420 aa0.64□□□□□ -2.31
SWM2YNR004W ACP1P32463 125 aa0.63□□□□□ -2.31
SWM2YNR004W GTT1P40582 234 aa0.63□□□□□ -2.31
SWM2YNR004W YLR118CQ12354 227 aa0.63□□□□□ -2.31
SWM2YNR004W ADK1P07170 222 aaKnown RBP0.62□□□□□ -2.31
SWM2YNR004W YHR173CP38864 112 aa0.62□□□□□ -2.31
SWM2YNR004W LCL1Q02786 101 aa0.62□□□□□ -2.31
SWM2YNR004W YLR099W-AQ3E798 87 aa0.62□□□□□ -2.31
SWM2YNR004W TY4B-JP47024 1803 aa0.61□□□□□ -2.31
SWM2YNR004W RTR2Q12378 196 aa0.61□□□□□ -2.31
SWM2YNR004W ECM5Q03214 1411 aa0.61□□□□□ -2.31
SWM2YNR004W MYO2P19524 1574 aaKnown RBP0.61□□□□□ -2.31
SWM2YNR004W HMRA2P0CY13 119 aa0.6□□□□□ -2.31
SWM2YNR004W SRB6P32570 121 aa0.6□□□□□ -2.31
SWM2YNR004W COX23P38824 151 aa0.6□□□□□ -2.31
SWM2YNR004W YHR130CP38834 111 aa0.6□□□□□ -2.31
SWM2YNR004W YGR164WP53291 111 aa0.6□□□□□ -2.31
SWM2YNR004W PAU12P53343 120 aa0.6□□□□□ -2.31
SWM2YNR004W YPK9Q12697 1472 aa0.6□□□□□ -2.31
SWM2YNR004W TRS20P38334 175 aa0.59□□□□□ -2.31
SWM2YNR004W VMA21P41806 77 aa0.59□□□□□ -2.31
SWM2YNR004W PAM16P42949 149 aa0.59□□□□□ -2.31
SWM2YNR004W YOR097CQ12274 175 aaPredicted RBP0.59□□□□□ -2.31
SWM2YNR004W YCL048W-AQ2V2Q2 79 aa0.59□□□□□ -2.31
SWM2YNR004W YOR376W-AQ3E805 51 aa0.59□□□□□ -2.31
SWM2YNR004W YER187WP40102 141 aa0.58□□□□□ -2.32
SWM2YNR004W SWC7Q06707 132 aa0.58□□□□□ -2.32
SWM2YNR004W WIP1Q2V2P8 89 aa0.58□□□□□ -2.32
SWM2YNR004W YOL164W-AQ3E7A5 60 aa0.58□□□□□ -2.32
SWM2YNR004W ATX1P38636 73 aa0.57□□□□□ -2.32
SWM2YNR004W YLR365WQ7LIF2 110 aa0.57□□□□□ -2.32
SWM2YNR004W LAA1P39526 2014 aa0.56□□□□□ -2.32
SWM2YNR004W LSM6Q06406 86 aaKnown RBP0.56□□□□□ -2.32
SWM2YNR004W RUB1Q03919 77 aa0.55□□□□□ -2.32
SWM2YNR004W YLR042CQ07990 161 aa0.55□□□□□ -2.32
SWM2YNR004W YOL118CQ08259 102 aa0.55□□□□□ -2.32
SWM2YNR004W PAU19P0CE85 124 aa0.54□□□□□ -2.32
SWM2YNR004W PAU3P25610 124 aa0.54□□□□□ -2.32
SWM2YNR004W AUA1P32450 94 aa0.54□□□□□ -2.32
SWM2YNR004W YHR138CP38841 114 aaPredicted RBP0.54□□□□□ -2.32
SWM2YNR004W YRF1-3P0CX14 1859 aa0.54□□□□□ -2.32
SWM2YNR004W YRF1-7P0CX15 1859 aa0.54□□□□□ -2.32
SWM2YNR004W SHU1P38751 150 aa0.53□□□□□ -2.32
SWM2YNR004W YAR029WP39549 74 aa0.53□□□□□ -2.32
SWM2YNR004W YIL086CP40503 102 aa0.53□□□□□ -2.32
SWM2YNR004W URA2P07259 2214 aaKnown RBP0.52□□□□□ -2.33
SWM2YNR004W PAU24P38155 120 aa0.52□□□□□ -2.33
SWM2YNR004W HUR1P45820 110 aa0.52□□□□□ -2.33
SWM2YNR004W IMP2P46972 177 aa0.52□□□□□ -2.33
SWM2YNR004W COX12Q01519 83 aa0.52□□□□□ -2.33
SWM2YNR004W COX19Q3E731 98 aa0.52□□□□□ -2.33
SWM2YNR004W YIR021W-AQ3E739 70 aa0.52□□□□□ -2.33
SWM2YNR004W YOR304C-AO14468 76 aa0.51□□□□□ -2.33
SWM2YNR004W PAU2P32612 120 aa0.51□□□□□ -2.33
SWM2YNR004W YIR020CP40575 100 aa0.51□□□□□ -2.33
SWM2YNR004W GSC2P40989 1895 aa0.51□□□□□ -2.33
SWM2YNR004W MPC2P38857 129 aa0.5□□□□□ -2.33
SWM2YNR004W YPL038W-AQ3E7B4 63 aa0.5□□□□□ -2.33
SWM2YNR004W DNA2P38859 1522 aa0.49□□□□□ -2.33
SWM2YNR004W PAU15P40585 124 aa0.49□□□□□ -2.33
SWM2YNR004W MRPS12P53732 153 aa0.49□□□□□ -2.33
SWM2YNR004W GCV3P39726 170 aaPredicted RBP0.48□□□□□ -2.33
SWM2YNR004W BLM10P43583 2143 aa0.47□□□□□ -2.33
SWM2YNR004W PAU16P35994 123 aa0.47□□□□□ -2.33
SWM2YNR004W TOP2P06786 1428 aaKnown RBP0.47□□□□□ -2.33
SWM2YNR004W YLR255CO13574 117 aa0.46□□□□□ -2.34
SWM2YNR004W YCR101CP25607 182 aa0.46□□□□□ -2.34
SWM2YNR004W MRP17P28778 131 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms