RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	ATP23	P53722	227 aa		4.09	□□□□□ -1.75
RPA49	YNL248C	YIL014C-A	Q02598	104 aa		4.09	□□□□□ -1.75
RPA49	YNL248C	SRL1	Q08673	210 aa		4.09	□□□□□ -1.75
RPA49	YNL248C	TMA7	Q3E764	64 aa	Known RBP	4.09	□□□□□ -1.75
RPA49	YNL248C	RPL27B	P0C2H7	136 aa	Known RBP	4.08	□□□□□ -1.76
RPA49	YNL248C	VMA16	P23968	213 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	INO2	P26798	304 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	YKR032W	P36127	104 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	PET8	P38921	284 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	MST28	P39552	234 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	VPS55	P47111	140 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	YJR096W	P47137	282 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	MIC26	P50087	233 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	TVP18	Q04767	167 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	RRG8	Q06109	277 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	IZH3	Q07959	543 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	YOR011W-A	Q3E807	68 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	Q0297	Q9ZZV8	51 aa		4.08	□□□□□ -1.76
RPA49	YNL248C	YKR070W	P36151	352 aa	Known RBP	4.07	□□□□□ -1.76
RPA49	YNL248C	YER076C	P40049	302 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	KEG1	P43614	200 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	YGR025W	P53216	100 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	YIP3	P53633	176 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	YDR366C	P87287	132 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	VPS71	Q03433	280 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	YML079W	Q03629	201 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	BET5	Q03630	159 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	SPG4	Q04438	115 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	HOR7	Q05827	59 aa		4.07	□□□□□ -1.76
RPA49	YNL248C	SAL1	D6W196	494 aa		4.06	□□□□□ -1.76
RPA49	YNL248C	KTI12	P34253	313 aa	Known RBP	4.06	□□□□□ -1.76
RPA49	YNL248C	YNL194C	P40169	301 aa		4.06	□□□□□ -1.76
RPA49	YNL248C	MRPL49	P40858	161 aa	Predicted RBP	4.06	□□□□□ -1.76
RPA49	YNL248C	YDR042C	Q03205	200 aa		4.06	□□□□□ -1.76
RPA49	YNL248C	PRM7	Q12459	698 aa		4.06	□□□□□ -1.76
RPA49	YNL248C	YLR363W-A	Q3E747	85 aa		4.06	□□□□□ -1.76
RPA49	YNL248C	GCN1	P33892	2672 aa	Known RBP	4.05	□□□□□ -1.76
RPA49	YNL248C	PFY1	P07274	126 aa		4.05	□□□□□ -1.76
RPA49	YNL248C	PRE1	P22141	198 aa	Known RBP	4.05	□□□□□ -1.76
RPA49	YNL248C	PCL2	P25693	308 aa		4.05	□□□□□ -1.76
RPA49	YNL248C	YHR022C	P38763	256 aa		4.05	□□□□□ -1.76
RPA49	YNL248C	RPF1	P38805	295 aa	Known RBP	4.05	□□□□□ -1.76
RPA49	YNL248C	CAX4	P53223	239 aa		4.05	□□□□□ -1.76
RPA49	YNL248C	YMR103C	Q04436	120 aa		4.05	□□□□□ -1.76
RPA49	YNL248C	AQY1	P0CD91	305 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	RPL43A	P0CX25	92 aa	Known RBP	4.04	□□□□□ -1.76
RPA49	YNL248C	RPL43B	P0CX26	92 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	HMRA2	P0CY13	119 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	AGA1	P32323	725 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	MRP49	P32388	137 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	ELF1	P36053	145 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	YKL044W	P36092	106 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	SPI1	P40092	148 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	DUO1	P53168	247 aa	Known RBP	4.04	□□□□□ -1.76
RPA49	YNL248C	MGR2	Q02889	113 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	DGA1	Q08650	418 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	YPR013C	Q12145	317 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	YOL085C	Q99345	113 aa		4.04	□□□□□ -1.76
RPA49	YNL248C	BPH1	P25356	2167 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	Q0255	P03881	472 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.76
RPA49	YNL248C	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.76
RPA49	YNL248C	RPB9	P27999	122 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	YER135C	P40082	130 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	YPL073C	P40323	161 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	GLO1	P50107	326 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	MOT3	P54785	490 aa	Known RBP	4.03	□□□□□ -1.76
RPA49	YNL248C	PRM3	Q08931	133 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	CCW12	Q12127	133 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	YNL146C-A	Q3E7Z1	64 aa		4.03	□□□□□ -1.76
RPA49	YNL248C	FCF1	Q05498	189 aa	Predicted RBP	4.02	□□□□□ -1.77
RPA49	YNL248C	YPL261C	Q08976	102 aa		4.02	□□□□□ -1.77
RPA49	YNL248C	YOR008C-A	Q3E7B9	74 aa		4.02	□□□□□ -1.77
RPA49	YNL248C	YCR041W	P37265	110 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	RPL32	P38061	130 aa	Known RBP	4.01	□□□□□ -1.77
RPA49	YNL248C	SIM1	P40472	476 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	TOS6	P48560	102 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	ELC1	Q03071	99 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	YLR112W	Q12130	139 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	YBR200W-A	Q3E755	54 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	YIL002W-A	Q3E7Z5	69 aa		4.01	□□□□□ -1.77
RPA49	YNL248C	VAR1	P02381	398 aa		4	□□□□□ -1.77
RPA49	YNL248C	YPR170W-B	P0C5R9	85 aa		4	□□□□□ -1.77
RPA49	YNL248C	DCV1	P43595	202 aa		4	□□□□□ -1.77
RPA49	YNL248C	PRP8	P33334	2413 aa	Known RBP	4	□□□□□ -1.77
RPA49	YNL248C	YER145C-A	A0A023PYF4	145 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	MBF1	O14467	151 aa	Known RBP	3.99	□□□□□ -1.77
RPA49	YNL248C	ANB1	P19211	157 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	YKL070W	P36087	169 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	MIG3	P39943	394 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	ALG13	P53178	202 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	YMR244W	Q04018	355 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	MRPL23	Q12487	163 aa	Predicted RBP	3.99	□□□□□ -1.77
RPA49	YNL248C	COA3	Q3E7B2	85 aa		3.99	□□□□□ -1.77
RPA49	YNL248C	PAI3	P01094	68 aa		3.98	□□□□□ -1.77
RPA49	YNL248C	RPL16B	P26785	198 aa	Known RBP	3.98	□□□□□ -1.77
RPA49	YNL248C	PRY2	P36110	329 aa		3.98	□□□□□ -1.77
RPA49	YNL248C	ECM33	P38248	429 aa	Known RBP	3.98	□□□□□ -1.77
RPA49	YNL248C	YDL186W	P48568	277 aa		3.98	□□□□□ -1.77
RPA49	YNL248C	AIM34	Q03673	198 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms