RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YGL034C	P53186	121 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	VPS28	Q02767	242 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	YOL160W	Q08321	113 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	DGA1	Q08650	418 aa		3.96	□□□□□ -1.78
CSL4	YNL232W	YCR025C	P25352	136 aa		3.95	□□□□□ -1.78
CSL4	YNL232W	PEX17	P40155	199 aa		3.95	□□□□□ -1.78
CSL4	YNL232W	DAD3	P69850	94 aa		3.95	□□□□□ -1.78
CSL4	YNL232W	PIS1	P06197	220 aa	Known RBP	3.94	□□□□□ -1.78
CSL4	YNL232W	MAG1	P22134	296 aa	Known RBP	3.94	□□□□□ -1.78
CSL4	YNL232W	SPO13	P23624	291 aa		3.94	□□□□□ -1.78
CSL4	YNL232W	POC4	Q12245	148 aa	Predicted RBP	3.94	□□□□□ -1.78
CSL4	YNL232W	YBL112C	Q3E7Y4	105 aa		3.94	□□□□□ -1.78
CSL4	YNL232W	YCR075W-A	Q3E830	75 aa		3.94	□□□□□ -1.78
CSL4	YNL232W	ADH1	P00330	348 aa	Known RBP	3.93	□□□□□ -1.78
CSL4	YNL232W	TIP1	P27654	210 aa	Predicted RBP	3.93	□□□□□ -1.78
CSL4	YNL232W	FPR2	P32472	135 aa		3.93	□□□□□ -1.78
CSL4	YNL232W	ERV15	P38312	142 aa		3.93	□□□□□ -1.78
CSL4	YNL232W	YLR179C	Q06252	201 aa	Known RBP	3.93	□□□□□ -1.78
CSL4	YNL232W	YOR385W	Q08909	290 aa		3.93	□□□□□ -1.78
CSL4	YNL232W	YPR014C	Q6B0W2	109 aa		3.93	□□□□□ -1.78
CSL4	YNL232W	YER039C-A	P0CD97	72 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	PRE5	P40302	234 aa	Known RBP	3.92	□□□□□ -1.78
CSL4	YNL232W	TOM7	P53507	60 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	ODC1	Q03028	310 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	TSC3	Q3E790	80 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	SUS1	Q6WNK7	96 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	YPL229W	Q99395	206 aa		3.92	□□□□□ -1.78
CSL4	YNL232W	MBF1	O14467	151 aa	Known RBP	3.91	□□□□□ -1.78
CSL4	YNL232W	RPL16A	P26784	199 aa	Known RBP	3.91	□□□□□ -1.78
CSL4	YNL232W	YEA6	P39953	335 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	NSE4	P43124	402 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	NAT3	Q06504	195 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	CCW12	Q12127	133 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	YLR112W	Q12130	139 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	AYT1	Q12226	474 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	PRR2	Q12310	699 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	YNL277W-A	Q3E7Z0	62 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	KTI11	Q3E840	82 aa		3.91	□□□□□ -1.78
CSL4	YNL232W	TIR1	P10863	254 aa		3.9	□□□□□ -1.79
CSL4	YNL232W	MRP17	P28778	131 aa		3.9	□□□□□ -1.79
CSL4	YNL232W	SPC1	P46965	94 aa		3.9	□□□□□ -1.79
CSL4	YNL232W	PBA1	Q05778	276 aa		3.9	□□□□□ -1.79
CSL4	YNL232W	YLL066W-B	Q8TGJ7	56 aa		3.9	□□□□□ -1.79
CSL4	YNL232W	YMR316C-A	I2HB70	103 aa		3.89	□□□□□ -1.79
CSL4	YNL232W	HYP2	P23301	157 aa	Known RBP	3.89	□□□□□ -1.79
CSL4	YNL232W	SRP21	P32342	167 aa		3.89	□□□□□ -1.79
CSL4	YNL232W	SHB17	P36136	271 aa	Known RBP	3.89	□□□□□ -1.79
CSL4	YNL232W	YHR022C	P38763	256 aa		3.89	□□□□□ -1.79
CSL4	YNL232W	ELC1	Q03071	99 aa		3.89	□□□□□ -1.79
CSL4	YNL232W	SFT2	P38166	215 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	PET8	P38921	284 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	HPA3	P39979	161 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	SFT1	P43682	97 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	YGL230C	P53074	147 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	YGL088W	P53151	121 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	TVP18	Q04767	167 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	COA4	Q05809	96 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	YPL264C	Q08980	353 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	DFM1	Q12743	341 aa	Known RBP	3.88	□□□□□ -1.79
CSL4	YNL232W	YCR024C-B	Q3E7Z8	88 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	YOL085C	Q99345	113 aa		3.88	□□□□□ -1.79
CSL4	YNL232W	RPL23A	P0CX41	137 aa	Known RBP	3.87	□□□□□ -1.79
CSL4	YNL232W	RPL23B	P0CX42	137 aa	Known RBP	3.87	□□□□□ -1.79
CSL4	YNL232W	MRPL20	P22354	195 aa	Predicted RBP	3.87	□□□□□ -1.79
CSL4	YNL232W	LSM2	P38203	95 aa	Known RBP	3.87	□□□□□ -1.79
CSL4	YNL232W	YBR090C	P38253	122 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	MBA1	P38300	278 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	TRS20	P38334	175 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	GTT1	P40582	234 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	SBH1	P52870	82 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	YLR042C	Q07990	161 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	YGL194C-A	Q2V2P6	80 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	YLR412C-A	Q3E742	68 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	YGR240C-A	Q3E786	66 aa		3.87	□□□□□ -1.79
CSL4	YNL232W	RPS25B	P0C0T4	108 aa	Known RBP	3.86	□□□□□ -1.79
CSL4	YNL232W	RPB11	P38902	120 aa		3.86	□□□□□ -1.79
CSL4	YNL232W	YER181C	P40097	107 aa		3.86	□□□□□ -1.79
CSL4	YNL232W	DSK2	P48510	373 aa		3.86	□□□□□ -1.79
CSL4	YNL232W	RPS25A	Q3E792	108 aa	Predicted RBP	3.86	□□□□□ -1.79
CSL4	YNL232W	Q0255	P03881	472 aa		3.85	□□□□□ -1.79
CSL4	YNL232W	EMP24	P32803	203 aa	Known RBP	3.85	□□□□□ -1.79
CSL4	YNL232W	ASP1	P38986	381 aa	Predicted RBP	3.85	□□□□□ -1.79
CSL4	YNL232W	COX14	P39103	70 aa		3.85	□□□□□ -1.79
CSL4	YNL232W	YPR145C-A	Q2V2P0	78 aa		3.85	□□□□□ -1.79
CSL4	YNL232W	RTC6	O14464	93 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	YDR034C-A	P0C289	58 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	CKS1	P20486	150 aa	Known RBP	3.84	□□□□□ -1.79
CSL4	YNL232W	SPT14	P32363	452 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	RPL14A	P36105	138 aa	Known RBP	3.84	□□□□□ -1.79
CSL4	YNL232W	RPL14B	P38754	138 aa	Known RBP	3.84	□□□□□ -1.79
CSL4	YNL232W	YHR140W	P38842	239 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	SKI6	P46948	246 aa	Predicted RBP	3.84	□□□□□ -1.79
CSL4	YNL232W	YJL028W	P47062	111 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	YCL001W-A	P87012	153 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	COA2	Q3E823	68 aa		3.84	□□□□□ -1.79
CSL4	YNL232W	RAD6	P06104	172 aa		3.83	□□□□□ -1.8
CSL4	YNL232W	ATP5	P09457	212 aa		3.83	□□□□□ -1.8
CSL4	YNL232W	AGA1	P32323	725 aa		3.83	□□□□□ -1.8
CSL4	YNL232W	YHR130C	P38834	111 aa		3.83	□□□□□ -1.8
CSL4	YNL232W	YHR139C-A	O13536	103 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms