RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W RPL33BP41056 107 aaKnown RBP2.17□□□□□ -2.06
UBP8YMR223W HUR1P45820 110 aa2.17□□□□□ -2.06
UBP8YMR223W ATP19P81451 68 aa2.17□□□□□ -2.06
UBP8YMR223W ELP6Q04868 273 aa2.17□□□□□ -2.06
UBP8YMR223W YLR296WQ05898 108 aa2.17□□□□□ -2.06
UBP8YMR223W COA6Q3E846 104 aa2.17□□□□□ -2.06
UBP8YMR223W YPK9Q12697 1472 aa2.16□□□□□ -2.06
UBP8YMR223W YBR013CP38215 129 aa2.16□□□□□ -2.06
UBP8YMR223W BOL2P53082 120 aa2.16□□□□□ -2.06
UBP8YMR223W RSM19P53733 91 aaPredicted RBP2.16□□□□□ -2.06
UBP8YMR223W MIX14Q04341 121 aa2.16□□□□□ -2.06
UBP8YMR223W PAU21P0CE86 164 aa2.15□□□□□ -2.07
UBP8YMR223W PAU22P0CE87 164 aa2.15□□□□□ -2.07
UBP8YMR223W YKR045CP36138 183 aa2.15□□□□□ -2.07
UBP8YMR223W PAU24P38155 120 aa2.15□□□□□ -2.07
UBP8YMR223W YGR269WP40326 108 aa2.15□□□□□ -2.07
UBP8YMR223W DCV1P43595 202 aa2.15□□□□□ -2.07
UBP8YMR223W BRP1P53194 125 aa2.15□□□□□ -2.07
UBP8YMR223W NMA1Q06178 401 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W CMC4Q3E7A9 73 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-DR5P0C2I2 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-DR6P0C2I3 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-LR2P0C2I5 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-LR3P0C2I6 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY1B-PR1P0C2I9 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY1B-PR3P0C2J1 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY1B-JR1P47098 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-ML2Q03434 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY1B-ER1Q03612 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-ML1Q04711 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY1B-GR2Q12269 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-OLQ12273 1755 aa2.15□□□□□ -2.07
UBP8YMR223W TY1B-PLQ12414 1755 aaKnown RBP2.15□□□□□ -2.07
UBP8YMR223W TY2B-BQ12491 1770 aa2.15□□□□□ -2.07
UBP8YMR223W LAA1P39526 2014 aa2.15□□□□□ -2.07
UBP8YMR223W MYO1P08964 1928 aa2.15□□□□□ -2.07
UBP8YMR223W YRF1-1P0CX20 1796 aa2.14□□□□□ -2.07
UBP8YMR223W YRF1-5P0CX21 1796 aa2.14□□□□□ -2.07
UBP8YMR223W YRF1-8P0CX22 1796 aa2.14□□□□□ -2.07
UBP8YMR223W FPR1P20081 114 aaKnown RBP2.14□□□□□ -2.07
UBP8YMR223W LSM2P38203 95 aaKnown RBP2.14□□□□□ -2.07
UBP8YMR223W YHL018WP38744 120 aaPredicted RBP2.14□□□□□ -2.07
UBP8YMR223W YER084WP40057 128 aa2.14□□□□□ -2.07
UBP8YMR223W CYB5P40312 120 aa2.14□□□□□ -2.07
UBP8YMR223W YFL065CP43539 102 aa2.14□□□□□ -2.07
UBP8YMR223W YDR042CQ03205 200 aa2.14□□□□□ -2.07
UBP8YMR223W YML079WQ03629 201 aa2.14□□□□□ -2.07
UBP8YMR223W YPR153WQ06537 140 aa2.14□□□□□ -2.07
UBP8YMR223W YPL261CQ08976 102 aa2.14□□□□□ -2.07
UBP8YMR223W YPR203WQ08994 102 aa2.14□□□□□ -2.07
UBP8YMR223W POC4Q12245 148 aaPredicted RBP2.14□□□□□ -2.07
UBP8YMR223W MMS1Q06211 1407 aa2.14□□□□□ -2.07
UBP8YMR223W DNF2Q12675 1612 aa2.13□□□□□ -2.07
UBP8YMR223W RTC6O14464 93 aa2.13□□□□□ -2.07
UBP8YMR223W FUN14P18411 198 aa2.13□□□□□ -2.07
UBP8YMR223W UTR5P32630 166 aa2.13□□□□□ -2.07
UBP8YMR223W SVP26P38869 228 aa2.13□□□□□ -2.07
UBP8YMR223W HSP10P38910 106 aa2.13□□□□□ -2.07
UBP8YMR223W YIR020CP40575 100 aa2.13□□□□□ -2.07
UBP8YMR223W YFL051CP43552 160 aa2.13□□□□□ -2.07
UBP8YMR223W DAN1P47178 298 aa2.13□□□□□ -2.07
UBP8YMR223W FIT2Q08906 153 aa2.13□□□□□ -2.07
UBP8YMR223W YMR175W-AQ3E766 64 aa2.13□□□□□ -2.07
UBP8YMR223W YHR213W-AQ8TGT4 77 aa2.13□□□□□ -2.07
UBP8YMR223W COX8P04039 78 aa2.12□□□□□ -2.07
UBP8YMR223W PAU19P0CE85 124 aa2.12□□□□□ -2.07
UBP8YMR223W YHR213WP0CI67 198 aa2.12□□□□□ -2.07
UBP8YMR223W PAU3P25610 124 aa2.12□□□□□ -2.07
UBP8YMR223W HSP150P32478 413 aa2.12□□□□□ -2.07
UBP8YMR223W HYR1P40581 163 aaKnown RBP2.12□□□□□ -2.07
UBP8YMR223W CIS3P47001 227 aa2.12□□□□□ -2.07
UBP8YMR223W YIL014C-AQ02598 104 aa2.12□□□□□ -2.07
UBP8YMR223W GRX5Q02784 150 aa2.12□□□□□ -2.07
UBP8YMR223W DAD1Q12248 94 aa2.12□□□□□ -2.07
UBP8YMR223W OST5Q92316 86 aa2.12□□□□□ -2.07
UBP8YMR223W GSC2P40989 1895 aa2.12□□□□□ -2.07
UBP8YMR223W RIF1P29539 1916 aa2.12□□□□□ -2.07
UBP8YMR223W YFR010W-AP0C5N0 62 aa2.11□□□□□ -2.07
UBP8YMR223W YCR085WP25650 117 aa2.11□□□□□ -2.07
UBP8YMR223W NRG2P38082 220 aa2.11□□□□□ -2.07
UBP8YMR223W YHR138CP38841 114 aaPredicted RBP2.11□□□□□ -2.07
UBP8YMR223W YGL149WP53116 101 aa2.11□□□□□ -2.07
UBP8YMR223W CUE4Q04201 117 aaPredicted RBP2.11□□□□□ -2.07
UBP8YMR223W YDR114CQ04597 100 aa2.11□□□□□ -2.07
UBP8YMR223W AVO2Q04749 426 aa2.11□□□□□ -2.07
UBP8YMR223W YDL157CQ12082 118 aa2.11□□□□□ -2.07
UBP8YMR223W VPS15P22219 1454 aa2.11□□□□□ -2.07
UBP8YMR223W ROM2P51862 1356 aaKnown RBP2.11□□□□□ -2.07
UBP8YMR223W NUP159P40477 1460 aa2.1□□□□□ -2.07
UBP8YMR223W SEC11P15367 167 aa2.1□□□□□ -2.07
UBP8YMR223W KRE1P17260 313 aa2.1□□□□□ -2.07
UBP8YMR223W YJR146WP47174 117 aa2.1□□□□□ -2.07
UBP8YMR223W RPL22BP56628 122 aaKnown RBP2.1□□□□□ -2.07
UBP8YMR223W NAT5Q08689 176 aa2.1□□□□□ -2.07
UBP8YMR223W PRM3Q08931 133 aa2.1□□□□□ -2.07
UBP8YMR223W MHF1Q3E835 90 aa2.1□□□□□ -2.07
UBP8YMR223W NTE1Q04958 1679 aa2.1□□□□□ -2.07
UBP8YMR223W MMS22Q06164 1454 aa2.1□□□□□ -2.07
UBP8YMR223W TY1B-JR2P47100 1755 aaKnown RBP2.1□□□□□ -2.07
UBP8YMR223W TY1B-ER2Q03619 1755 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms