RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W POM33Q12164 279 aa3.44□□□□□ -1.86
CBF5YLR175W RPL27AP0C2H6 136 aaKnown RBP3.43□□□□□ -1.86
CBF5YLR175W CYT2Q00873 224 aa3.43□□□□□ -1.86
CBF5YLR175W GRH1Q04410 372 aaKnown RBP3.43□□□□□ -1.86
CBF5YLR175W RPL2AP0CX45 254 aaKnown RBP3.42□□□□□ -1.86
CBF5YLR175W RPL2BP0CX46 254 aaKnown RBP3.42□□□□□ -1.86
CBF5YLR175W AGA1P32323 725 aa3.42□□□□□ -1.86
CBF5YLR175W YHR140WP38842 239 aa3.42□□□□□ -1.86
CBF5YLR175W KEG1P43614 200 aa3.42□□□□□ -1.86
CBF5YLR175W YGR149WP48236 432 aa3.42□□□□□ -1.86
CBF5YLR175W THG1P53215 237 aaKnown RBP3.42□□□□□ -1.86
CBF5YLR175W YDR366CP87287 132 aa3.42□□□□□ -1.86
CBF5YLR175W ARL3Q02804 198 aa3.42□□□□□ -1.86
CBF5YLR175W GPI19Q04082 140 aa3.42□□□□□ -1.86
CBF5YLR175W YLR281CQ05863 155 aa3.42□□□□□ -1.86
CBF5YLR175W YCR024C-BQ3E7Z8 88 aa3.42□□□□□ -1.86
CBF5YLR175W DYN1P36022 4092 aa3.42□□□□□ -1.86
CBF5YLR175W AQY1P0CD91 305 aa3.41□□□□□ -1.86
CBF5YLR175W RPS11AP0CX47 156 aaKnown RBP3.41□□□□□ -1.86
CBF5YLR175W RPS11BP0CX48 156 aaKnown RBP3.41□□□□□ -1.86
CBF5YLR175W ZRT1P32804 376 aa3.41□□□□□ -1.86
CBF5YLR175W YCH1P42937 148 aa3.41□□□□□ -1.86
CBF5YLR175W BRP1P53194 125 aa3.41□□□□□ -1.86
CBF5YLR175W DIA1P54005 336 aa3.41□□□□□ -1.86
CBF5YLR175W GTO3Q04806 366 aa3.41□□□□□ -1.86
CBF5YLR175W YBR200W-AQ3E755 54 aa3.41□□□□□ -1.86
CBF5YLR175W YOL085CQ99345 113 aa3.41□□□□□ -1.86
CBF5YLR175W RPL23AP0CX41 137 aaKnown RBP3.41□□□□□ -1.86
CBF5YLR175W RPL23BP0CX42 137 aaKnown RBP3.41□□□□□ -1.86
CBF5YLR175W MRPL28P36527 147 aa3.41□□□□□ -1.86
CBF5YLR175W VHS2P40463 436 aa3.41□□□□□ -1.86
CBF5YLR175W SDS23P53172 527 aa3.41□□□□□ -1.86
CBF5YLR175W COX12Q01519 83 aa3.41□□□□□ -1.86
CBF5YLR175W FSF1Q12029 327 aaKnown RBP3.41□□□□□ -1.86
CBF5YLR175W STF1P01098 86 aa3.4□□□□□ -1.87
CBF5YLR175W SEC4P07560 215 aaKnown RBP3.4□□□□□ -1.87
CBF5YLR175W YFR035CP43608 114 aa3.4□□□□□ -1.87
CBF5YLR175W YGL118CP53132 145 aa3.4□□□□□ -1.87
CBF5YLR175W CUE4Q04201 117 aaPredicted RBP3.4□□□□□ -1.87
CBF5YLR175W Q0255P03881 472 aa3.39□□□□□ -1.87
CBF5YLR175W RPL16BP26785 198 aaKnown RBP3.39□□□□□ -1.87
CBF5YLR175W YGR017WP53210 297 aa3.39□□□□□ -1.87
CBF5YLR175W AIM34Q03673 198 aa3.39□□□□□ -1.87
CBF5YLR175W MSC3Q05812 728 aa3.39□□□□□ -1.87
CBF5YLR175W SSS1P35179 80 aa3.38□□□□□ -1.87
CBF5YLR175W YKR032WP36127 104 aa3.38□□□□□ -1.87
CBF5YLR175W TEM1P38987 245 aa3.38□□□□□ -1.87
CBF5YLR175W RRT13P40042 185 aa3.38□□□□□ -1.87
CBF5YLR175W TVP18Q04767 167 aa3.38□□□□□ -1.87
CBF5YLR175W DXO1Q06349 442 aa3.38□□□□□ -1.87
CBF5YLR175W VAM10Q08474 114 aa3.38□□□□□ -1.87
CBF5YLR175W RPL42AP0CX27 106 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W RPL42BP0CX28 106 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W GSP1P32835 219 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W GSP2P32836 220 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W KTI12P34253 313 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W UIP3P39547 235 aa3.37□□□□□ -1.87
CBF5YLR175W SEC72P39742 193 aaKnown RBP3.37□□□□□ -1.87
CBF5YLR175W OST3P48439 350 aa3.37□□□□□ -1.87
CBF5YLR175W MGR2Q02889 113 aa3.37□□□□□ -1.87
CBF5YLR175W WIP1Q2V2P8 89 aa3.37□□□□□ -1.87
CBF5YLR175W YCR075W-AQ3E830 75 aa3.37□□□□□ -1.87
CBF5YLR175W COA6Q3E846 104 aa3.37□□□□□ -1.87
CBF5YLR175W HOT13P36078 116 aa3.36□□□□□ -1.87
CBF5YLR175W PET8P38921 284 aa3.36□□□□□ -1.87
CBF5YLR175W YNL200CP40165 246 aaKnown RBP3.36□□□□□ -1.87
CBF5YLR175W YPS5P53057 165 aa3.36□□□□□ -1.87
CBF5YLR175W EOS1P53938 366 aa3.36□□□□□ -1.87
CBF5YLR175W SAL1D6W196 494 aa3.35□□□□□ -1.87
CBF5YLR175W PFY1P07274 126 aa3.35□□□□□ -1.87
CBF5YLR175W AUA1P32450 94 aa3.35□□□□□ -1.87
CBF5YLR175W NRG2P38082 220 aa3.35□□□□□ -1.87
CBF5YLR175W YIL014C-AQ02598 104 aa3.35□□□□□ -1.87
CBF5YLR175W YLR042CQ07990 161 aa3.35□□□□□ -1.87
CBF5YLR175W HTL1Q9URQ5 78 aa3.35□□□□□ -1.87
CBF5YLR175W YCR023CP25351 611 aa3.35□□□□□ -1.87
CBF5YLR175W YKR070WP36151 352 aaKnown RBP3.35□□□□□ -1.87
CBF5YLR175W YER134CP40081 178 aa3.35□□□□□ -1.87
CBF5YLR175W TOS6P48560 102 aa3.35□□□□□ -1.87
CBF5YLR175W FCF1Q05498 189 aaPredicted RBP3.35□□□□□ -1.87
CBF5YLR175W YGR240C-AQ3E786 66 aa3.35□□□□□ -1.87
CBF5YLR175W PAU16P35994 123 aa3.34□□□□□ -1.88
CBF5YLR175W KRE9P39005 276 aa3.34□□□□□ -1.88
CBF5YLR175W YER076CP40049 302 aa3.34□□□□□ -1.88
CBF5YLR175W CDC40P40968 455 aaPredicted RBP3.34□□□□□ -1.88
CBF5YLR175W DCV1P43595 202 aa3.34□□□□□ -1.88
CBF5YLR175W ATP23P53722 227 aa3.34□□□□□ -1.88
CBF5YLR175W SGF11Q03067 99 aa3.34□□□□□ -1.88
CBF5YLR175W YDR042CQ03205 200 aa3.34□□□□□ -1.88
CBF5YLR175W SCW10Q04951 389 aa3.34□□□□□ -1.88
CBF5YLR175W CNL1Q06333 122 aa3.34□□□□□ -1.88
CBF5YLR175W YIL134C-AQ45U18 67 aa3.34□□□□□ -1.88
CBF5YLR175W YCR001WP25347 104 aa3.33□□□□□ -1.88
CBF5YLR175W MRPL11P36521 249 aaPredicted RBP3.33□□□□□ -1.88
CBF5YLR175W YNL217WP40152 326 aa3.33□□□□□ -1.88
CBF5YLR175W YJL028WP47062 111 aa3.33□□□□□ -1.88
CBF5YLR175W LSM8P47093 109 aaKnown RBP3.33□□□□□ -1.88
CBF5YLR175W ERV14P53173 138 aa3.33□□□□□ -1.88
CBF5YLR175W SEN15Q04675 128 aa3.33□□□□□ -1.88
CBF5YLR175W RDS3Q06835 107 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms