RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	YFR035C	P43608	114 aa		0.29	□□□□□ -2.36
NUP82	YJL061W	YGL041C-B	Q3E750	60 aa		0.29	□□□□□ -2.36
NUP82	YJL061W	SNF2	P22082	1703 aa		0.28	□□□□□ -2.36
NUP82	YJL061W	SFT1	P43682	97 aa		0.28	□□□□□ -2.36
NUP82	YJL061W	YJL197C-A	P0C5P0	93 aa		0.27	□□□□□ -2.37
NUP82	YJL061W	YKL044W	P36092	106 aa		0.27	□□□□□ -2.37
NUP82	YJL061W	GAT4	P40569	121 aa		0.27	□□□□□ -2.37
NUP82	YJL061W	YGL204C	P53089	101 aa		0.27	□□□□□ -2.37
NUP82	YJL061W	LCL1	Q02786	101 aa		0.27	□□□□□ -2.37
NUP82	YJL061W	AUA1	P32450	94 aa		0.26	□□□□□ -2.37
NUP82	YJL061W	YEA6	P39953	335 aa		0.26	□□□□□ -2.37
NUP82	YJL061W	SAE3	P89114	91 aa		0.26	□□□□□ -2.37
NUP82	YJL061W	YDR010C	Q12426	110 aa		0.26	□□□□□ -2.37
NUP82	YJL061W	YLR361C-A	Q3E795	98 aa		0.26	□□□□□ -2.37
NUP82	YJL061W	BLM10	P43583	2143 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	YGR042W	P53227	271 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	TIM8	P57744	87 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	YIL014C-A	Q02598	104 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	GPI19	Q04082	140 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	SLO1	Q3E784	85 aa		0.25	□□□□□ -2.37
NUP82	YJL061W	BNI1	P41832	1953 aa		0.24	□□□□□ -2.37
NUP82	YJL061W	YPK9	Q12697	1472 aa		0.24	□□□□□ -2.37
NUP82	YJL061W	SNF11	P38956	169 aa		0.23	□□□□□ -2.37
NUP82	YJL061W	CYB5	P40312	120 aa		0.23	□□□□□ -2.37
NUP82	YJL061W	NKP2	Q06162	153 aa		0.23	□□□□□ -2.37
NUP82	YJL061W	YOR376W-A	Q3E805	51 aa		0.23	□□□□□ -2.37
NUP82	YJL061W	POP7	P38291	140 aa		0.22	□□□□□ -2.37
NUP82	YJL061W	YLR285C-A	Q3E771	56 aa		0.22	□□□□□ -2.37
NUP82	YJL061W	MYO2	P19524	1574 aa	Known RBP	0.22	□□□□□ -2.37
NUP82	YJL061W	OST5	Q92316	86 aa		0.22	□□□□□ -2.37
NUP82	YJL061W	SEC16	P48415	2195 aa	Known RBP	0.21	□□□□□ -2.38
NUP82	YJL061W	VPS55	P47111	140 aa		0.21	□□□□□ -2.38
NUP82	YJL061W	FRQ1	Q06389	190 aa		0.21	□□□□□ -2.38
NUP82	YJL061W	DYN2	Q02647	92 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	ECM5	Q03214	1411 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	SPC24	Q04477	213 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	YPL261C	Q08976	102 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	PAU12	P53343	120 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	YBR072C-A	Q3E794	53 aa		0.2	□□□□□ -2.38
NUP82	YJL061W	FAS2	P19097	1887 aa	Known RBP	0.2	□□□□□ -2.38
NUP82	YJL061W	MRP49	P32388	137 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	YHR173C	P38864	112 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	YLR363W-A	Q3E747	85 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	YOL164W-A	Q3E7A5	60 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	MYO1	P08964	1928 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	COX23	P38824	151 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	YHR130C	P38834	111 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	TDA2	P40045	126 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	PCC1	Q3E833	88 aa		0.19	□□□□□ -2.38
NUP82	YJL061W	URB1	P34241	1764 aa	Known RBP	0.19	□□□□□ -2.38
NUP82	YJL061W	DNA2	P38859	1522 aa		0.18	□□□□□ -2.38
NUP82	YJL061W	MRPS12	P53732	153 aa		0.18	□□□□□ -2.38
NUP82	YJL061W	RPL22B	P56628	122 aa	Known RBP	0.18	□□□□□ -2.38
NUP82	YJL061W	SPC2	Q04969	178 aa		0.18	□□□□□ -2.38
NUP82	YJL061W	ACP1	P32463	125 aa		0.17	□□□□□ -2.38
NUP82	YJL061W	YRF1-6	P53819	1859 aa		0.17	□□□□□ -2.38
NUP82	YJL061W	TY4B-H	P0C2J7	1802 aa		0.17	□□□□□ -2.38
NUP82	YJL061W	SNN1	P48232	102 aa		0.16	□□□□□ -2.38
NUP82	YJL061W	AIM11	P87275	137 aa		0.16	□□□□□ -2.38
NUP82	YJL061W	YLR118C	Q12354	227 aa		0.16	□□□□□ -2.38
NUP82	YJL061W	RAD50	P12753	1312 aa		0.16	□□□□□ -2.38
NUP82	YJL061W	BRR2	P32639	2163 aa	Known RBP	0.15	□□□□□ -2.39
NUP82	YJL061W	HMRA2	P0CY13	119 aa		0.15	□□□□□ -2.39
NUP82	YJL061W	RPB11	P38902	120 aa		0.15	□□□□□ -2.39
NUP82	YJL061W	VMA7	P39111	118 aa		0.15	□□□□□ -2.39
NUP82	YJL061W	YER187W	P40102	141 aa		0.15	□□□□□ -2.39
NUP82	YJL061W	SEC7	P11075	2009 aa	Known RBP	0.15	□□□□□ -2.39
NUP82	YJL061W	YCR099C	P25657	155 aa		0.14	□□□□□ -2.39
NUP82	YJL061W	DAD1	Q12248	94 aa		0.14	□□□□□ -2.39
NUP82	YJL061W	YIR020C	P40575	100 aa		0.14	□□□□□ -2.39
NUP82	YJL061W	YLR099W-A	Q3E798	87 aa		0.13	□□□□□ -2.39
NUP82	YJL061W	ADK1	P07170	222 aa	Known RBP	0.12	□□□□□ -2.39
NUP82	YJL061W	PAU24	P38155	120 aa		0.12	□□□□□ -2.39
NUP82	YJL061W	GCV3	P39726	170 aa	Predicted RBP	0.12	□□□□□ -2.39
NUP82	YJL061W	YOR097C	Q12274	175 aa	Predicted RBP	0.12	□□□□□ -2.39
NUP82	YJL061W	GTT1	P40582	234 aa		0.11	□□□□□ -2.39
NUP82	YJL061W	YCL048W-A	Q2V2Q2	79 aa		0.11	□□□□□ -2.39
NUP82	YJL061W	PAU2	P32612	120 aa		0.11	□□□□□ -2.39
NUP82	YJL061W	YIL086C	P40503	102 aa		0.11	□□□□□ -2.39
NUP82	YJL061W	SHU1	P38751	150 aa		0.1	□□□□□ -2.39
NUP82	YJL061W	MDN1	Q12019	4910 aa	Known RBP	0.09	□□□□□ -2.39
NUP82	YJL061W	YAR029W	P39549	74 aa		0.09	□□□□□ -2.4
NUP82	YJL061W	YLR255C	O13574	117 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	PAU19	P0CE85	124 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	PAU3	P25610	124 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	RPA12	P32529	125 aa	Known RBP	0.08	□□□□□ -2.4
NUP82	YJL061W	PAM16	P42949	149 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	LSM6	Q06406	86 aa	Known RBP	0.08	□□□□□ -2.4
NUP82	YJL061W	YLR365W	Q7LIF2	110 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	IMP2	P46972	177 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	TAO3	P40468	2376 aa		0.08	□□□□□ -2.4
NUP82	YJL061W	YNL190W	P53872	204 aa		0.07	□□□□□ -2.4
NUP82	YJL061W	YOL118C	Q08259	102 aa		0.07	□□□□□ -2.4
NUP82	YJL061W	APS2	Q00381	147 aa		0.07	□□□□□ -2.4
NUP82	YJL061W	RTR2	Q12378	196 aa		0.07	□□□□□ -2.4
NUP82	YJL061W	COX19	Q3E731	98 aa		0.07	□□□□□ -2.4
NUP82	YJL061W	CCW14	O13547	238 aa		0.06	□□□□□ -2.4
NUP82	YJL061W	YLR042C	Q07990	161 aa		0.06	□□□□□ -2.4
NUP82	YJL061W	TOP2	P06786	1428 aa	Known RBP	0.06	□□□□□ -2.4
NUP82	YJL061W	YHR138C	P38841	114 aa	Predicted RBP	0.05	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms