RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YIL014C-AQ02598 104 aa0.76□□□□□ -2.29
SMD1YGR074W HUG1Q6Q5K6 68 aa0.76□□□□□ -2.29
SMD1YGR074W YPK9Q12697 1472 aa0.75□□□□□ -2.29
SMD1YGR074W MRPL31P14063 131 aaPredicted RBP0.75□□□□□ -2.29
SMD1YGR074W RPB11P38902 120 aa0.75□□□□□ -2.29
SMD1YGR074W MIC27P50945 234 aa0.75□□□□□ -2.29
SMD1YGR074W YIR021W-AQ3E739 70 aa0.75□□□□□ -2.29
SMD1YGR074W YLR099W-AQ3E798 87 aa0.75□□□□□ -2.29
SMD1YGR074W YCR099CP25657 155 aa0.74□□□□□ -2.29
SMD1YGR074W EMP24P32803 203 aaKnown RBP0.74□□□□□ -2.29
SMD1YGR074W AIM4P38305 123 aaPredicted RBP0.74□□□□□ -2.29
SMD1YGR074W SNF11P38956 169 aa0.74□□□□□ -2.29
SMD1YGR074W YIL163CP40448 117 aa0.74□□□□□ -2.29
SMD1YGR074W YOR097CQ12274 175 aaPredicted RBP0.74□□□□□ -2.29
SMD1YGR074W ECM5Q03214 1411 aa0.73□□□□□ -2.29
SMD1YGR074W RPL22AP05749 121 aaKnown RBP0.73□□□□□ -2.29
SMD1YGR074W SPC24Q04477 213 aa0.73□□□□□ -2.29
SMD1YGR074W YMR321CQ04898 105 aa0.73□□□□□ -2.29
SMD1YGR074W OCA6Q12454 224 aa0.73□□□□□ -2.29
SMD1YGR074W WIP1Q2V2P8 89 aa0.73□□□□□ -2.29
SMD1YGR074W OST5Q92316 86 aa0.73□□□□□ -2.29
SMD1YGR074W URB1P34241 1764 aaKnown RBP0.73□□□□□ -2.29
SMD1YGR074W SEC7P11075 2009 aaKnown RBP0.72□□□□□ -2.29
SMD1YGR074W RPO41P13433 1351 aaKnown RBP0.72□□□□□ -2.29
SMD1YGR074W POR2P40478 281 aa0.72□□□□□ -2.29
SMD1YGR074W YFR035CP43608 114 aa0.72□□□□□ -2.29
SMD1YGR074W YLR194CQ05777 254 aa0.72□□□□□ -2.29
SMD1YGR074W YPL261CQ08976 102 aa0.72□□□□□ -2.29
SMD1YGR074W YGL041C-BQ3E750 60 aa0.72□□□□□ -2.29
SMD1YGR074W YOR376W-AQ3E805 51 aa0.72□□□□□ -2.29
SMD1YGR074W SRX1P36077 127 aa0.71□□□□□ -2.3
SMD1YGR074W TDA2P40045 126 aa0.71□□□□□ -2.3
SMD1YGR074W GTT1P40582 234 aa0.71□□□□□ -2.3
SMD1YGR074W RPL22BP56628 122 aaKnown RBP0.71□□□□□ -2.3
SMD1YGR074W YOR034C-AQ3E735 80 aa0.71□□□□□ -2.3
SMD1YGR074W RPL43AP0CX25 92 aaKnown RBP0.7□□□□□ -2.3
SMD1YGR074W RPL43BP0CX26 92 aa0.7□□□□□ -2.3
SMD1YGR074W DAD1Q12248 94 aa0.7□□□□□ -2.3
SMD1YGR074W RTR2Q12378 196 aa0.7□□□□□ -2.3
SMD1YGR074W YGR240C-AQ3E786 66 aa0.7□□□□□ -2.3
SMD1YGR074W TY4B-HP0C2J7 1802 aa0.7□□□□□ -2.3
SMD1YGR074W YER187WP40102 141 aa0.69□□□□□ -2.3
SMD1YGR074W YLR363W-AQ3E747 85 aa0.69□□□□□ -2.3
SMD1YGR074W ENV10Q99382 181 aa0.69□□□□□ -2.3
SMD1YGR074W SPP41P38904 1435 aa0.69□□□□□ -2.3
SMD1YGR074W BNI1P41832 1953 aa0.68□□□□□ -2.3
SMD1YGR074W PAM16P42949 149 aa0.68□□□□□ -2.3
SMD1YGR074W YJR128WP47162 119 aa0.68□□□□□ -2.3
SMD1YGR074W SWC7Q06707 132 aa0.68□□□□□ -2.3
SMD1YGR074W YLR307C-AQ3E825 87 aa0.68□□□□□ -2.3
SMD1YGR074W PCC1Q3E833 88 aa0.68□□□□□ -2.3
SMD1YGR074W YLR365WQ7LIF2 110 aa0.68□□□□□ -2.3
SMD1YGR074W MDS3P53094 1487 aa0.67□□□□□ -2.3
SMD1YGR074W YAR029WP39549 74 aa0.67□□□□□ -2.3
SMD1YGR074W YIR020CP40575 100 aa0.67□□□□□ -2.3
SMD1YGR074W SNN1P48232 102 aa0.67□□□□□ -2.3
SMD1YGR074W YGR164WP53291 111 aa0.67□□□□□ -2.3
SMD1YGR074W PAU12P53343 120 aa0.67□□□□□ -2.3
SMD1YGR074W ARL3Q02804 198 aa0.67□□□□□ -2.3
SMD1YGR074W YLR042CQ07990 161 aa0.67□□□□□ -2.3
SMD1YGR074W SEC16P48415 2195 aaKnown RBP0.66□□□□□ -2.3
SMD1YGR074W YOR304C-AO14468 76 aa0.66□□□□□ -2.3
SMD1YGR074W COX23P38824 151 aa0.66□□□□□ -2.3
SMD1YGR074W YHR130CP38834 111 aa0.66□□□□□ -2.3
SMD1YGR074W CYB5P40312 120 aa0.66□□□□□ -2.3
SMD1YGR074W YCL048W-AQ2V2Q2 79 aa0.66□□□□□ -2.3
SMD1YGR074W YLR285C-AQ3E771 56 aa0.66□□□□□ -2.3
SMD1YGR074W URA2P07259 2214 aaKnown RBP0.65□□□□□ -2.3
SMD1YGR074W FAS2P19097 1887 aaKnown RBP0.65□□□□□ -2.3
SMD1YGR074W DNA2P38859 1522 aa0.65□□□□□ -2.31
SMD1YGR074W YLR157W-EP0CF00 54 aa0.65□□□□□ -2.31
SMD1YGR074W VMA21P41806 77 aa0.65□□□□□ -2.31
SMD1YGR074W VPS55P47111 140 aa0.65□□□□□ -2.31
SMD1YGR074W MYO1P08964 1928 aa0.65□□□□□ -2.31
SMD1YGR074W YEA6P39953 335 aa0.64□□□□□ -2.31
SMD1YGR074W HUR1P45820 110 aa0.64□□□□□ -2.31
SMD1YGR074W BLM10P43583 2143 aa0.64□□□□□ -2.31
SMD1YGR074W BRR2P32639 2163 aaKnown RBP0.62□□□□□ -2.31
SMD1YGR074W YER039C-AP0CD97 72 aa0.62□□□□□ -2.31
SMD1YGR074W PAU2P32612 120 aa0.62□□□□□ -2.31
SMD1YGR074W LCL1Q02786 101 aa0.62□□□□□ -2.31
SMD1YGR074W YLR419WQ06698 1435 aaKnown RBP0.62□□□□□ -2.31
SMD1YGR074W ADK1P07170 222 aaKnown RBP0.61□□□□□ -2.31
SMD1YGR074W PAU19P0CE85 124 aa0.61□□□□□ -2.31
SMD1YGR074W PAU3P25610 124 aa0.61□□□□□ -2.31
SMD1YGR074W GNA1P43577 159 aaPredicted RBP0.61□□□□□ -2.31
SMD1YGR074W HMRA2P0CY13 119 aa0.6□□□□□ -2.31
SMD1YGR074W PAU24P38155 120 aa0.6□□□□□ -2.31
SMD1YGR074W YHR138CP38841 114 aaPredicted RBP0.6□□□□□ -2.31
SMD1YGR074W MRPS12P53732 153 aa0.6□□□□□ -2.31
SMD1YGR074W LSM6Q06406 86 aaKnown RBP0.6□□□□□ -2.31
SMD1YGR074W YOL118CQ08259 102 aa0.6□□□□□ -2.31
SMD1YGR074W YDR010CQ12426 110 aa0.6□□□□□ -2.31
SMD1YGR074W YOS1Q3E834 85 aa0.6□□□□□ -2.31
SMD1YGR074W BPT1P14772 1559 aa0.59□□□□□ -2.31
SMD1YGR074W TSC11P40061 1430 aa0.59□□□□□ -2.31
SMD1YGR074W SRB6P32570 121 aa0.59□□□□□ -2.31
SMD1YGR074W RUB1Q03919 77 aa0.59□□□□□ -2.31
SMD1YGR074W YBR072C-AQ3E794 53 aa0.59□□□□□ -2.31
SMD1YGR074W CCW14O13547 238 aa0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms