RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C DDI2P0CH63 225 aa2.48□□□□□ -2.01
XRN1YGL173C DDI3P0CH64 225 aa2.48□□□□□ -2.01
XRN1YGL173C DIE2P50076 525 aa2.48□□□□□ -2.01
XRN1YGL173C NHP10Q03435 203 aa2.48□□□□□ -2.01
XRN1YGL173C YMR244WQ04018 355 aa2.48□□□□□ -2.01
XRN1YGL173C TRA1P38811 3744 aa2.48□□□□□ -2.01
XRN1YGL173C YPR170W-BP0C5R9 85 aa2.48□□□□□ -2.01
XRN1YGL173C TRS20P38334 175 aa2.48□□□□□ -2.01
XRN1YGL173C HUT1Q12520 339 aa2.48□□□□□ -2.01
XRN1YGL173C COA6Q3E846 104 aa2.48□□□□□ -2.01
XRN1YGL173C RIO2P40160 425 aaKnown RBP2.48□□□□□ -2.01
XRN1YGL173C YAE1P47118 141 aaPredicted RBP2.48□□□□□ -2.01
XRN1YGL173C LIP1Q03579 150 aa2.48□□□□□ -2.01
XRN1YGL173C SEC11P15367 167 aa2.47□□□□□ -2.01
XRN1YGL173C YHR140WP38842 239 aa2.47□□□□□ -2.01
XRN1YGL173C YIL059CP40520 121 aa2.47□□□□□ -2.01
XRN1YGL173C HPA2Q06592 156 aa2.47□□□□□ -2.01
XRN1YGL173C YOL029CQ08187 201 aa2.47□□□□□ -2.01
XRN1YGL173C HAP3P13434 144 aa2.47□□□□□ -2.01
XRN1YGL173C YJL218WP40892 196 aaKnown RBP2.47□□□□□ -2.01
XRN1YGL173C SFT1P43682 97 aa2.47□□□□□ -2.01
XRN1YGL173C BAT2P47176 376 aaKnown RBP2.47□□□□□ -2.01
XRN1YGL173C GAL83Q04739 417 aa2.47□□□□□ -2.01
XRN1YGL173C YHR214C-EQ8TGK0 99 aa2.47□□□□□ -2.01
XRN1YGL173C RPS25BP0C0T4 108 aaKnown RBP2.47□□□□□ -2.01
XRN1YGL173C KRE9P39005 276 aa2.47□□□□□ -2.01
XRN1YGL173C NMA1Q06178 401 aaKnown RBP2.47□□□□□ -2.01
XRN1YGL173C NAT5Q08689 176 aa2.47□□□□□ -2.01
XRN1YGL173C RPS25AQ3E792 108 aaPredicted RBP2.47□□□□□ -2.01
XRN1YGL173C PEX4P29340 183 aa2.47□□□□□ -2.01
XRN1YGL173C AIM18P38884 321 aa2.47□□□□□ -2.01
XRN1YGL173C YPR174CQ06616 221 aaPredicted RBP2.47□□□□□ -2.01
XRN1YGL173C RAD28Q12021 506 aa2.46□□□□□ -2.02
XRN1YGL173C ATG8P38182 117 aaRIP-Chip data2.46□□□□□ -2.02not detected
XRN1YGL173C YOR097CQ12274 175 aaPredicted RBP2.46□□□□□ -2.02
XRN1YGL173C MRPL44P19956 98 aa2.45□□□□□ -2.02
XRN1YGL173C ERV15P38312 142 aa2.45□□□□□ -2.02
XRN1YGL173C EST3Q03096 181 aa2.45□□□□□ -2.02
XRN1YGL173C TOM1Q03280 3268 aa2.45□□□□□ -2.02
XRN1YGL173C SOD1P00445 154 aaKnown RBP2.45□□□□□ -2.02
XRN1YGL173C YGL230CP53074 147 aa2.45□□□□□ -2.02
XRN1YGL173C RPL13AQ12690 199 aaPredicted RBP2.45□□□□□ -2.02
XRN1YGL173C YLR236CA0A023PZG4 107 aa2.44□□□□□ -2.02
XRN1YGL173C CSI2Q08054 341 aa2.44□□□□□ -2.02
XRN1YGL173C OCA6Q12454 224 aa2.44□□□□□ -2.02
XRN1YGL173C BOL1Q3E793 110 aa2.44□□□□□ -2.02
XRN1YGL173C GCN1P33892 2672 aaKnown RBP2.44□□□□□ -2.02
XRN1YGL173C VMA21P41806 77 aa2.44□□□□□ -2.02
XRN1YGL173C BUD25P85052 153 aa2.44□□□□□ -2.02
XRN1YGL173C RAD10P06838 210 aa2.44□□□□□ -2.02
XRN1YGL173C YFR010W-AP0C5N0 62 aa2.44□□□□□ -2.02
XRN1YGL173C YKL044WP36092 106 aa2.44□□□□□ -2.02
XRN1YGL173C YGR269WP40326 108 aa2.44□□□□□ -2.02
XRN1YGL173C SBH1P52870 82 aa2.44□□□□□ -2.02
XRN1YGL173C UPS1Q05776 175 aa2.44□□□□□ -2.02
XRN1YGL173C GPI19Q04082 140 aa2.44□□□□□ -2.02
XRN1YGL173C YDR114CQ04597 100 aa2.44□□□□□ -2.02
XRN1YGL173C SLH1P53327 1967 aaKnown RBP2.43□□□□□ -2.02
XRN1YGL173C IRC19Q07843 230 aa2.43□□□□□ -2.02
XRN1YGL173C SDH4P37298 181 aa2.43□□□□□ -2.02
XRN1YGL173C DAD1Q12248 94 aa2.43□□□□□ -2.02
XRN1YGL173C YDR274CP87283 123 aa2.43□□□□□ -2.02
XRN1YGL173C SUS1Q6WNK7 96 aa2.43□□□□□ -2.02
XRN1YGL173C BUD23P25627 275 aaPredicted RBP2.42□□□□□ -2.02
XRN1YGL173C YKR032WP36127 104 aa2.42□□□□□ -2.02
XRN1YGL173C RIM9Q04734 239 aa2.42□□□□□ -2.02
XRN1YGL173C RAF1Q06891 181 aa2.42□□□□□ -2.02
XRN1YGL173C ATG41Q12048 136 aa2.42□□□□□ -2.02
XRN1YGL173C PEP8P40335 379 aa2.42□□□□□ -2.02
XRN1YGL173C GNA1P43577 159 aaPredicted RBP2.42□□□□□ -2.02
XRN1YGL173C RPL36BO14455 100 aaKnown RBP2.42□□□□□ -2.02
XRN1YGL173C RPL36AP05745 100 aaPredicted RBP2.42□□□□□ -2.02
XRN1YGL173C SML1Q04964 104 aa2.42□□□□□ -2.02
XRN1YGL173C FYV5P25585 152 aa2.42□□□□□ -2.02
XRN1YGL173C YHR130CP38834 111 aa2.42□□□□□ -2.02
XRN1YGL173C GTT1P40582 234 aa2.42□□□□□ -2.02
XRN1YGL173C YPL067CQ02754 198 aa2.42□□□□□ -2.02
XRN1YGL173C MHF2Q3E829 80 aa2.42□□□□□ -2.02
XRN1YGL173C FUN14P18411 198 aa2.41□□□□□ -2.02
XRN1YGL173C YOL014WQ08110 124 aa2.41□□□□□ -2.02
XRN1YGL173C FZF1P32805 299 aa2.41□□□□□ -2.02
XRN1YGL173C ECM31P38122 312 aa2.41□□□□□ -2.02
XRN1YGL173C SAY1P53324 424 aa2.41□□□□□ -2.02
XRN1YGL173C YMR090WQ04304 227 aaKnown RBP2.41□□□□□ -2.02
XRN1YGL173C IRC23Q08416 157 aa2.41□□□□□ -2.02
XRN1YGL173C UIP4Q08926 304 aa2.41□□□□□ -2.02
XRN1YGL173C YOR032W-AQ8TGS1 66 aa2.41□□□□□ -2.02
XRN1YGL173C YCR099CP25657 155 aa2.41□□□□□ -2.02
XRN1YGL173C YOR062CP36025 268 aa2.41□□□□□ -2.02
XRN1YGL173C DSE2P38844 325 aa2.41□□□□□ -2.02
XRN1YGL173C YJL144WP47009 104 aa2.41□□□□□ -2.02
XRN1YGL173C HMRA2P0CY13 119 aa2.41□□□□□ -2.02
XRN1YGL173C YIL086CP40503 102 aa2.41□□□□□ -2.02
XRN1YGL173C YMR252CQ04814 134 aa2.41□□□□□ -2.02
XRN1YGL173C AGA2P32781 87 aa2.4□□□□□ -2.02
XRN1YGL173C YOR376W-AQ3E805 51 aa2.4□□□□□ -2.03
XRN1YGL173C YSF3P0C074 85 aaPredicted RBP2.4□□□□□ -2.03
XRN1YGL173C IPT1P38954 527 aa2.4□□□□□ -2.03
XRN1YGL173C TEL1P38110 2787 aa2.4□□□□□ -2.03
XRN1YGL173C QCR10P37299 77 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms