RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene SLD5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD5	YDR489W	SAE3	P89114	91 aa		0.68	□□□□□ -2.3
SLD5	YDR489W	YIL014C-A	Q02598	104 aa		0.68	□□□□□ -2.3
SLD5	YDR489W	GAT4	P40569	121 aa		0.67	□□□□□ -2.3
SLD5	YDR489W	MPC1	P53157	130 aa	Known RBP	0.67	□□□□□ -2.3
SLD5	YDR489W	YDR278C	Q05612	105 aa		0.67	□□□□□ -2.3
SLD5	YDR489W	BRR2	P32639	2163 aa	Known RBP	0.67	□□□□□ -2.3
SLD5	YDR489W	SEC16	P48415	2195 aa	Known RBP	0.67	□□□□□ -2.3
SLD5	YDR489W	URB1	P34241	1764 aa	Known RBP	0.67	□□□□□ -2.3
SLD5	YDR489W	SEC7	P11075	2009 aa	Known RBP	0.66	□□□□□ -2.3
SLD5	YDR489W	EMP24	P32803	203 aa	Known RBP	0.66	□□□□□ -2.3
SLD5	YDR489W	GPI19	Q04082	140 aa		0.66	□□□□□ -2.3
SLD5	YDR489W	RPL22A	P05749	121 aa	Known RBP	0.65	□□□□□ -2.31
SLD5	YDR489W	MRP49	P32388	137 aa		0.65	□□□□□ -2.31
SLD5	YDR489W	SNF11	P38956	169 aa		0.65	□□□□□ -2.31
SLD5	YDR489W	YJR128W	P47162	119 aa		0.65	□□□□□ -2.31
SLD5	YDR489W	DYN2	Q02647	92 aa		0.65	□□□□□ -2.31
SLD5	YDR489W	ARL3	Q02804	198 aa		0.65	□□□□□ -2.31
SLD5	YDR489W	YFR035C	P43608	114 aa		0.64	□□□□□ -2.31
SLD5	YDR489W	PAU12	P53343	120 aa		0.64	□□□□□ -2.31
SLD5	YDR489W	SPC24	Q04477	213 aa		0.64	□□□□□ -2.31
SLD5	YDR489W	CYB5	P40312	120 aa		0.63	□□□□□ -2.31
SLD5	YDR489W	LCL1	Q02786	101 aa		0.63	□□□□□ -2.31
SLD5	YDR489W	SPC2	Q04969	178 aa		0.63	□□□□□ -2.31
SLD5	YDR489W	NKP2	Q06162	153 aa		0.63	□□□□□ -2.31
SLD5	YDR489W	MYO1	P08964	1928 aa		0.62	□□□□□ -2.31
SLD5	YDR489W	YHR130C	P38834	111 aa		0.62	□□□□□ -2.31
SLD5	YDR489W	YGR240C-A	Q3E786	66 aa		0.62	□□□□□ -2.31
SLD5	YDR489W	FAS2	P19097	1887 aa	Known RBP	0.62	□□□□□ -2.31
SLD5	YDR489W	MYO2	P19524	1574 aa	Known RBP	0.62	□□□□□ -2.31
SLD5	YDR489W	YRF1-6	P53819	1859 aa		0.61	□□□□□ -2.31
SLD5	YDR489W	YLR285C-A	Q3E771	56 aa		0.61	□□□□□ -2.31
SLD5	YDR489W	RAD50	P12753	1312 aa		0.61	□□□□□ -2.31
SLD5	YDR489W	AUA1	P32450	94 aa		0.6	□□□□□ -2.31
SLD5	YDR489W	TDA2	P40045	126 aa		0.6	□□□□□ -2.31
SLD5	YDR489W	OCA6	Q12454	224 aa		0.6	□□□□□ -2.31
SLD5	YDR489W	DNA2	P38859	1522 aa		0.59	□□□□□ -2.31
SLD5	YDR489W	YJL197C-A	P0C5P0	93 aa		0.59	□□□□□ -2.31
SLD5	YDR489W	YGL041C-B	Q3E750	60 aa		0.59	□□□□□ -2.31
SLD5	YDR489W	YLR099W-A	Q3E798	87 aa		0.59	□□□□□ -2.31
SLD5	YDR489W	POP7	P38291	140 aa		0.58	□□□□□ -2.32
SLD5	YDR489W	COX23	P38824	151 aa		0.58	□□□□□ -2.32
SLD5	YDR489W	ICS3	P47034	131 aa		0.58	□□□□□ -2.32
SLD5	YDR489W	VPS55	P47111	140 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	FRQ1	Q06389	190 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	YPL261C	Q08976	102 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	YLR118C	Q12354	227 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	PCC1	Q3E833	88 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	OST5	Q92316	86 aa		0.57	□□□□□ -2.32
SLD5	YDR489W	YEA6	P39953	335 aa		0.56	□□□□□ -2.32
SLD5	YDR489W	SLO1	Q3E784	85 aa		0.56	□□□□□ -2.32
SLD5	YDR489W	TY4B-H	P0C2J7	1802 aa		0.55	□□□□□ -2.32
SLD5	YDR489W	HMRA2	P0CY13	119 aa		0.55	□□□□□ -2.32
SLD5	YDR489W	PAU24	P38155	120 aa		0.54	□□□□□ -2.32
SLD5	YDR489W	RPB11	P38902	120 aa		0.54	□□□□□ -2.32
SLD5	YDR489W	VMA7	P39111	118 aa		0.54	□□□□□ -2.32
SLD5	YDR489W	MRPS12	P53732	153 aa		0.54	□□□□□ -2.32
SLD5	YDR489W	PAU2	P32612	120 aa		0.53	□□□□□ -2.32
SLD5	YDR489W	YAR029W	P39549	74 aa		0.53	□□□□□ -2.32
SLD5	YDR489W	ADK1	P07170	222 aa	Known RBP	0.52	□□□□□ -2.33
SLD5	YDR489W	RPL22B	P56628	122 aa	Known RBP	0.52	□□□□□ -2.33
SLD5	YDR489W	AIM11	P87275	137 aa		0.52	□□□□□ -2.33
SLD5	YDR489W	YER187W	P40102	141 aa		0.51	□□□□□ -2.33
SLD5	YDR489W	SNN1	P48232	102 aa		0.51	□□□□□ -2.33
SLD5	YDR489W	ECM5	Q03214	1411 aa		0.51	□□□□□ -2.33
SLD5	YDR489W	YLR363W-A	Q3E747	85 aa		0.51	□□□□□ -2.33
SLD5	YDR489W	YLR042C	Q07990	161 aa		0.5	□□□□□ -2.33
SLD5	YDR489W	YOL164W-A	Q3E7A5	60 aa		0.5	□□□□□ -2.33
SLD5	YDR489W	YPK9	Q12697	1472 aa		0.49	□□□□□ -2.33
SLD5	YDR489W	YHR173C	P38864	112 aa		0.49	□□□□□ -2.33
SLD5	YDR489W	DAD1	Q12248	94 aa		0.49	□□□□□ -2.33
SLD5	YDR489W	YCR099C	P25657	155 aa		0.48	□□□□□ -2.33
SLD5	YDR489W	YOR097C	Q12274	175 aa	Predicted RBP	0.48	□□□□□ -2.33
SLD5	YDR489W	WIP1	Q2V2P8	89 aa		0.48	□□□□□ -2.33
SLD5	YDR489W	PAU19	P0CE85	124 aa		0.47	□□□□□ -2.33
SLD5	YDR489W	PAU3	P25610	124 aa		0.47	□□□□□ -2.33
SLD5	YDR489W	YIR020C	P40575	100 aa		0.47	□□□□□ -2.33
SLD5	YDR489W	RPS29B	P41058	56 aa	Known RBP	0.47	□□□□□ -2.33
SLD5	YDR489W	PAM16	P42949	149 aa		0.47	□□□□□ -2.33
SLD5	YDR489W	YDR010C	Q12426	110 aa		0.47	□□□□□ -2.33
SLD5	YDR489W	POL2	P21951	2222 aa	Known RBP	0.47	□□□□□ -2.33
SLD5	YDR489W	TAO3	P40468	2376 aa		0.46	□□□□□ -2.34
SLD5	YDR489W	YLR255C	O13574	117 aa		0.43	□□□□□ -2.34
SLD5	YDR489W	RPA12	P32529	125 aa	Known RBP	0.43	□□□□□ -2.34
SLD5	YDR489W	APS2	Q00381	147 aa		0.43	□□□□□ -2.34
SLD5	YDR489W	RTR2	Q12378	196 aa		0.43	□□□□□ -2.34
SLD5	YDR489W	GCV3	P39726	170 aa	Predicted RBP	0.42	□□□□□ -2.34
SLD5	YDR489W	LSM6	Q06406	86 aa	Known RBP	0.42	□□□□□ -2.34
SLD5	YDR489W	YLR365W	Q7LIF2	110 aa		0.42	□□□□□ -2.34
SLD5	YDR489W	YBR072C-A	Q3E794	53 aa		0.41	□□□□□ -2.34
SLD5	YDR489W	GTT1	P40582	234 aa		0.4	□□□□□ -2.35
SLD5	YDR489W	BUD23	P25627	275 aa	Predicted RBP	0.39	□□□□□ -2.35
SLD5	YDR489W	PAU16	P35994	123 aa		0.39	□□□□□ -2.35
SLD5	YDR489W	PAU15	P40585	124 aa		0.39	□□□□□ -2.35
SLD5	YDR489W	SHU1	P38751	150 aa		0.38	□□□□□ -2.35
SLD5	YDR489W	IMP2	P46972	177 aa		0.38	□□□□□ -2.35
SLD5	YDR489W	YOL118C	Q08259	102 aa		0.37	□□□□□ -2.35
SLD5	YDR489W	YIL086C	P40503	102 aa		0.36	□□□□□ -2.35
SLD5	YDR489W	YHR138C	P38841	114 aa	Predicted RBP	0.35	□□□□□ -2.35
SLD5	YDR489W	YCL048W-A	Q2V2Q2	79 aa		0.35	□□□□□ -2.35
SLD5	YDR489W	TOP2	P06786	1428 aa	Known RBP	0.35	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms