RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YER188C-AP0C0V2 99 aa1.54□□□□□ -2.16
SHU2YDR078C YIL163CP40448 117 aa1.54□□□□□ -2.16
SHU2YDR078C YFR035CP43608 114 aa1.54□□□□□ -2.16
SHU2YDR078C YLR042CQ07990 161 aa1.54□□□□□ -2.16
SHU2YDR078C FIT3Q08907 204 aa1.54□□□□□ -2.16
SHU2YDR078C YOR097CQ12274 175 aaPredicted RBP1.54□□□□□ -2.16
SHU2YDR078C YIR021W-AQ3E739 70 aa1.53□□□□□ -2.16
SHU2YDR078C YCR099CP25657 155 aa1.52□□□□□ -2.17
SHU2YDR078C YHR130CP38834 111 aa1.52□□□□□ -2.17
SHU2YDR078C YAR029WP39549 74 aa1.52□□□□□ -2.17
SHU2YDR078C YMR141CP40211 102 aa1.52□□□□□ -2.17
SHU2YDR078C YIL014C-AQ02598 104 aa1.52□□□□□ -2.17
SHU2YDR078C HUG1Q6Q5K6 68 aa1.52□□□□□ -2.17
SHU2YDR078C YJL197C-AP0C5P0 93 aa1.51□□□□□ -2.17
SHU2YDR078C PAU12P53343 120 aa1.51□□□□□ -2.17
SHU2YDR078C YPL261CQ08976 102 aa1.51□□□□□ -2.17
SHU2YDR078C PAM16P42949 149 aa1.5□□□□□ -2.17
SHU2YDR078C RTR2Q12378 196 aa1.5□□□□□ -2.17
SHU2YDR078C OST5Q92316 86 aa1.5□□□□□ -2.17
SHU2YDR078C ENV10Q99382 181 aa1.5□□□□□ -2.17
SHU2YDR078C ECM5Q03214 1411 aa1.49□□□□□ -2.17
SHU2YDR078C YOR304C-AO14468 76 aa1.49□□□□□ -2.17
SHU2YDR078C RPL22AP05749 121 aaKnown RBP1.49□□□□□ -2.17
SHU2YDR078C EMP24P32803 203 aaKnown RBP1.48□□□□□ -2.17
SHU2YDR078C PCC1Q3E833 88 aa1.48□□□□□ -2.17
SHU2YDR078C MRPL31P14063 131 aaPredicted RBP1.47□□□□□ -2.17
SHU2YDR078C YER187WP40102 141 aa1.47□□□□□ -2.17
SHU2YDR078C CYB5P40312 120 aa1.46□□□□□ -2.18
SHU2YDR078C ARL3Q02804 198 aa1.46□□□□□ -2.18
SHU2YDR078C RUB1Q03919 77 aa1.46□□□□□ -2.18
SHU2YDR078C SRX1P36077 127 aa1.45□□□□□ -2.18
SHU2YDR078C COX23P38824 151 aa1.45□□□□□ -2.18
SHU2YDR078C POR2P40478 281 aa1.45□□□□□ -2.18
SHU2YDR078C DAD1Q12248 94 aa1.45□□□□□ -2.18
SHU2YDR078C YLR285C-AQ3E771 56 aa1.45□□□□□ -2.18
SHU2YDR078C SNN1P48232 102 aa1.44□□□□□ -2.18
SHU2YDR078C RPL22BP56628 122 aaKnown RBP1.44□□□□□ -2.18
SHU2YDR078C GSC2P40989 1895 aa1.43□□□□□ -2.18
SHU2YDR078C ICS3P47034 131 aa1.43□□□□□ -2.18
SHU2YDR078C YMR321CQ04898 105 aa1.43□□□□□ -2.18
SHU2YDR078C YGL041C-BQ3E750 60 aa1.43□□□□□ -2.18
SHU2YDR078C YLR365WQ7LIF2 110 aa1.43□□□□□ -2.18
SHU2YDR078C SPP41P38904 1435 aa1.42□□□□□ -2.18
SHU2YDR078C YER039C-AP0CD97 72 aa1.42□□□□□ -2.18
SHU2YDR078C PAU2P32612 120 aa1.42□□□□□ -2.18
SHU2YDR078C PAU24P38155 120 aa1.42□□□□□ -2.18
SHU2YDR078C YGR240C-AQ3E786 66 aa1.42□□□□□ -2.18
SHU2YDR078C RPL43AP0CX25 92 aaKnown RBP1.41□□□□□ -2.18
SHU2YDR078C RPL43BP0CX26 92 aa1.41□□□□□ -2.18
SHU2YDR078C LHP1P33399 275 aaKnown RBP1.41□□□□□ -2.18
SHU2YDR078C OCA6Q12454 224 aa1.41□□□□□ -2.18
SHU2YDR078C YIR020CP40575 100 aa1.4□□□□□ -2.19
SHU2YDR078C GTT1P40582 234 aa1.4□□□□□ -2.19
SHU2YDR078C YOR034C-AQ3E735 80 aa1.4□□□□□ -2.19
SHU2YDR078C YLR363W-AQ3E747 85 aa1.4□□□□□ -2.19
SHU2YDR078C HMRA2P0CY13 119 aa1.39□□□□□ -2.19
SHU2YDR078C DNA2P38859 1522 aa1.38□□□□□ -2.19
SHU2YDR078C PAU19P0CE85 124 aa1.37□□□□□ -2.19
SHU2YDR078C PAU3P25610 124 aa1.37□□□□□ -2.19
SHU2YDR078C TY4B-JP47024 1803 aa1.37□□□□□ -2.19
SHU2YDR078C YEA6P39953 335 aa1.36□□□□□ -2.19
SHU2YDR078C VPS55P47111 140 aa1.36□□□□□ -2.19
SHU2YDR078C YJR128WP47162 119 aa1.36□□□□□ -2.19
SHU2YDR078C YER137CP40083 148 aaKnown RBP1.35□□□□□ -2.19
SHU2YDR078C LCL1Q02786 101 aa1.35□□□□□ -2.19
SHU2YDR078C HUR1P45820 110 aa1.34□□□□□ -2.19
SHU2YDR078C YPK9Q12697 1472 aa1.33□□□□□ -2.2
SHU2YDR078C YGR164WP53291 111 aa1.33□□□□□ -2.2
SHU2YDR078C MRPS12P53732 153 aa1.33□□□□□ -2.2
SHU2YDR078C YLR307C-AQ3E825 87 aa1.33□□□□□ -2.2
SHU2YDR078C YLR157W-EP0CF00 54 aa1.32□□□□□ -2.2
SHU2YDR078C BUD23P25627 275 aaPredicted RBP1.32□□□□□ -2.2
SHU2YDR078C VMA21P41806 77 aa1.32□□□□□ -2.2
SHU2YDR078C GNA1P43577 159 aaPredicted RBP1.32□□□□□ -2.2
SHU2YDR078C RPS12P48589 143 aaKnown RBP1.3□□□□□ -2.2
SHU2YDR078C SWC7Q06707 132 aa1.3□□□□□ -2.2
SHU2YDR078C PAU16P35994 123 aa1.29□□□□□ -2.2
SHU2YDR078C PAU15P40585 124 aa1.29□□□□□ -2.2
SHU2YDR078C LSM6Q06406 86 aaKnown RBP1.29□□□□□ -2.2
SHU2YDR078C YMR103CQ04436 120 aa1.28□□□□□ -2.2
SHU2YDR078C YCL048W-AQ2V2Q2 79 aa1.28□□□□□ -2.2
SHU2YDR078C YRF1-3P0CX14 1859 aa1.28□□□□□ -2.2
SHU2YDR078C YRF1-7P0CX15 1859 aa1.28□□□□□ -2.2
SHU2YDR078C MDS3P53094 1487 aa1.27□□□□□ -2.21
SHU2YDR078C YHR138CP38841 114 aaPredicted RBP1.27□□□□□ -2.21
SHU2YDR078C RGI1P40043 161 aaPredicted RBP1.27□□□□□ -2.21
SHU2YDR078C LYS2P07702 1392 aa1.26□□□□□ -2.21
SHU2YDR078C YOS1Q3E834 85 aa1.26□□□□□ -2.21
SHU2YDR078C MIC10Q96VH5 97 aa1.26□□□□□ -2.21
SHU2YDR078C TSC11P40061 1430 aa1.25□□□□□ -2.21
SHU2YDR078C TY1B-HO13535 1793 aa1.25□□□□□ -2.21
SHU2YDR078C YLR419WQ06698 1435 aaKnown RBP1.24□□□□□ -2.21
SHU2YDR078C YMR090WQ04304 227 aaKnown RBP1.24□□□□□ -2.21
SHU2YDR078C YOL118CQ08259 102 aa1.24□□□□□ -2.21
SHU2YDR078C LAA1P39526 2014 aa1.23□□□□□ -2.21
SHU2YDR078C YCR101CP25607 182 aa1.23□□□□□ -2.21
SHU2YDR078C SRB6P32570 121 aa1.23□□□□□ -2.21
SHU2YDR078C YBR090CP38253 122 aa1.22□□□□□ -2.21
SHU2YDR078C IMP2P46972 177 aa1.22□□□□□ -2.21
SHU2YDR078C UBC4P15731 148 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms