RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YLR342W-AQ3E810 57 aa3.06□□□□□ -1.92
RPO21YDL140C HUG1Q6Q5K6 68 aa3.06□□□□□ -1.92
RPO21YDL140C BUD23P25627 275 aaPredicted RBP3.06□□□□□ -1.92
RPO21YDL140C MIC12P38341 106 aa3.06□□□□□ -1.92
RPO21YDL140C PAU4P53427 120 aa3.06□□□□□ -1.92
RPO21YDL140C COA3Q3E7B2 85 aa3.06□□□□□ -1.92
RPO21YDL140C YNL042W-BQ3E7Z2 85 aa3.06□□□□□ -1.92
RPO21YDL140C YMR141CP40211 102 aa3.06□□□□□ -1.92
RPO21YDL140C TAX4P47030 604 aa3.06□□□□□ -1.92
RPO21YDL140C TAD2P47058 250 aa3.06□□□□□ -1.92
RPO21YDL140C ELC1Q03071 99 aa3.06□□□□□ -1.92
RPO21YDL140C RIM15P43565 1770 aa3.06□□□□□ -1.92
RPO21YDL140C ADH3P07246 375 aaKnown RBP3.06□□□□□ -1.92
RPO21YDL140C VMA16P23968 213 aa3.06□□□□□ -1.92
RPO21YDL140C ATG8P38182 117 aaRIP-Chip data3.06□□□□□ -1.92not detected
RPO21YDL140C YHL037CP38733 133 aa3.06□□□□□ -1.92
RPO21YDL140C HHO1P53551 258 aa3.06□□□□□ -1.92
RPO21YDL140C DPP1Q05521 289 aa3.06□□□□□ -1.92
RPO21YDL140C SOH1P38633 127 aa3.05□□□□□ -1.92
RPO21YDL140C AIM19P40502 157 aa3.05□□□□□ -1.92
RPO21YDL140C SAE3P89114 91 aa3.05□□□□□ -1.92
RPO21YDL140C DYN2Q02647 92 aa3.05□□□□□ -1.92
RPO21YDL140C YGL015CP33199 130 aa3.05□□□□□ -1.92
RPO21YDL140C HMRA1P0CY11 126 aa3.05□□□□□ -1.92
RPO21YDL140C YPS1P32329 569 aa3.05□□□□□ -1.92
RPO21YDL140C SLM6P38343 150 aa3.05□□□□□ -1.92
RPO21YDL140C YGL235WP53071 178 aa3.05□□□□□ -1.92
RPO21YDL140C EOS1P53938 366 aa3.05□□□□□ -1.92
RPO21YDL140C MRPS8Q03799 155 aa3.05□□□□□ -1.92
RPO21YDL140C YMR252CQ04814 134 aa3.05□□□□□ -1.92
RPO21YDL140C MRL1Q06815 381 aa3.05□□□□□ -1.92
RPO21YDL140C YLR415CO13578 112 aa3.04□□□□□ -1.92
RPO21YDL140C SPC25P40014 221 aa3.04□□□□□ -1.92
RPO21YDL140C YPS5P53057 165 aa3.04□□□□□ -1.92
RPO21YDL140C ISD11Q6Q560 94 aa3.04□□□□□ -1.92
RPO21YDL140C FLO5P38894 1075 aa3.04□□□□□ -1.92
RPO21YDL140C GCV3P39726 170 aaPredicted RBP3.04□□□□□ -1.92
RPO21YDL140C GPI19Q04082 140 aa3.04□□□□□ -1.92
RPO21YDL140C YMR317WQ04893 1140 aa3.04□□□□□ -1.92
RPO21YDL140C YPR108W-AQ3E7B3 70 aa3.04□□□□□ -1.92
RPO21YDL140C ACC1Q00955 2233 aaKnown RBP3.04□□□□□ -1.92
RPO21YDL140C TOA2P32774 122 aa3.04□□□□□ -1.92
RPO21YDL140C ZRT1P32804 376 aa3.04□□□□□ -1.92
RPO21YDL140C POG1P40473 351 aa3.04□□□□□ -1.92
RPO21YDL140C FCY1Q12178 158 aa3.04□□□□□ -1.92
RPO21YDL140C MYO1P08964 1928 aa3.04□□□□□ -1.92
RPO21YDL140C URA2P07259 2214 aaKnown RBP3.03□□□□□ -1.92
RPO21YDL140C RPR2P40571 144 aa3.03□□□□□ -1.92
RPO21YDL140C YFL051CP43552 160 aa3.03□□□□□ -1.92
RPO21YDL140C YNL146C-AQ3E7Z1 64 aa3.03□□□□□ -1.92
RPO21YDL140C YAR068WP39564 161 aa3.03□□□□□ -1.92
RPO21YDL140C YLR050CQ12155 161 aaKnown RBP3.03□□□□□ -1.92
RPO21YDL140C QCR8P08525 94 aa3.03□□□□□ -1.92
RPO21YDL140C YKR070WP36151 352 aaKnown RBP3.03□□□□□ -1.92
RPO21YDL140C API2Q04413 109 aa3.03□□□□□ -1.92
RPO21YDL140C CCW12Q12127 133 aa3.03□□□□□ -1.92
RPO21YDL140C YHL042WP38729 150 aa3.03□□□□□ -1.93
RPO21YDL140C SPI1P40092 148 aa3.03□□□□□ -1.93
RPO21YDL140C YKE4P40544 346 aa3.03□□□□□ -1.93
RPO21YDL140C PTR3P43606 678 aa3.03□□□□□ -1.93
RPO21YDL140C GIS2P53849 153 aaKnown RBP RIP-Chip data3.03□□□□□ -1.93not detected
RPO21YDL140C SMX3P54999 86 aaPredicted RBP3.03□□□□□ -1.93
RPO21YDL140C GSC2P40989 1895 aa3.02□□□□□ -1.93
RPO21YDL140C MEC1P38111 2368 aa3.02□□□□□ -1.93
RPO21YDL140C UBC11P52492 156 aa3.02□□□□□ -1.93
RPO21YDL140C YHP1Q04116 353 aa3.02□□□□□ -1.93
RPO21YDL140C RPL18AP0CX49 186 aaKnown RBP3.02□□□□□ -1.93
RPO21YDL140C RPL18BP0CX50 186 aaKnown RBP3.02□□□□□ -1.93
RPO21YDL140C YLR112WQ12130 139 aa3.02□□□□□ -1.93
RPO21YDL140C YPR014CQ6B0W2 109 aa3.02□□□□□ -1.93
RPO21YDL140C YDR034W-BQ6Q5X2 51 aa3.02□□□□□ -1.93
RPO21YDL140C GRE1Q08969 168 aa3.02□□□□□ -1.93
RPO21YDL140C YOR020W-AQ3E824 90 aa3.02□□□□□ -1.93
RPO21YDL140C DCV1P43595 202 aa3.01□□□□□ -1.93
RPO21YDL140C YDL242WQ07746 117 aa3.01□□□□□ -1.93
RPO21YDL140C PAI3P01094 68 aa3.01□□□□□ -1.93
RPO21YDL140C DDI2P0CH63 225 aa3.01□□□□□ -1.93
RPO21YDL140C DDI3P0CH64 225 aa3.01□□□□□ -1.93
RPO21YDL140C SKI6P46948 246 aaPredicted RBP3.01□□□□□ -1.93
RPO21YDL140C FYV5P25585 152 aa3.01□□□□□ -1.93
RPO21YDL140C PAM16P42949 149 aa3.01□□□□□ -1.93
RPO21YDL140C DDR2P89113 61 aa3.01□□□□□ -1.93
RPO21YDL140C EST3Q03096 181 aa3.01□□□□□ -1.93
RPO21YDL140C PRM7Q12459 698 aa3.01□□□□□ -1.93
RPO21YDL140C YNL234WP53857 426 aa3.01□□□□□ -1.93
RPO21YDL140C SEC11P15367 167 aa3□□□□□ -1.93
RPO21YDL140C VMA3P25515 160 aa3□□□□□ -1.93
RPO21YDL140C SRP21P32342 167 aa3□□□□□ -1.93
RPO21YDL140C NSE4P43124 402 aa3□□□□□ -1.93
RPO21YDL140C YCR043CP25361 127 aa3□□□□□ -1.93
RPO21YDL140C PHS1P40857 217 aa3□□□□□ -1.93
RPO21YDL140C HST4P53688 370 aa3□□□□□ -1.93
RPO21YDL140C DIF1O13577 133 aa3□□□□□ -1.93
RPO21YDL140C PRE1P22141 198 aaKnown RBP3□□□□□ -1.93
RPO21YDL140C PBP4Q07362 185 aaKnown RBP3□□□□□ -1.93
RPO21YDL140C FIT2Q08906 153 aa3□□□□□ -1.93
RPO21YDL140C UBC4P15731 148 aa2.99□□□□□ -1.93
RPO21YDL140C SRL3P36167 246 aa2.99□□□□□ -1.93
RPO21YDL140C COF1Q03048 143 aaKnown RBP2.99□□□□□ -1.93
RPO21YDL140C YMR007WQ03675 126 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms