RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C VMA21P41806 77 aa1.11□□□□□ -2.23
PBP4YDL053C HUR1P45820 110 aa1.11□□□□□ -2.23
PBP4YDL053C PAU12P53343 120 aa1.11□□□□□ -2.23
PBP4YDL053C YPL261CQ08976 102 aa1.11□□□□□ -2.23
PBP4YDL053C YKL068W-AQ3E826 78 aa1.11□□□□□ -2.23
PBP4YDL053C KSH1Q8TGJ3 72 aa1.11□□□□□ -2.23
PBP4YDL053C OST5Q92316 86 aa1.11□□□□□ -2.23
PBP4YDL053C SLH1P53327 1967 aaKnown RBP1.1□□□□□ -2.23
PBP4YDL053C LYS2P07702 1392 aa1.1□□□□□ -2.23
PBP4YDL053C CAT8P39113 1433 aa1.1□□□□□ -2.23
PBP4YDL053C PDR11P40550 1411 aa1.1□□□□□ -2.23
PBP4YDL053C GEA1P47102 1408 aaPredicted RBP1.1□□□□□ -2.23
PBP4YDL053C RTC6O14464 93 aa1.1□□□□□ -2.23
PBP4YDL053C PAU2P32612 120 aa1.1□□□□□ -2.23
PBP4YDL053C RPL22BP56628 122 aaKnown RBP1.1□□□□□ -2.23
PBP4YDL053C YIL014C-AQ02598 104 aa1.1□□□□□ -2.23
PBP4YDL053C NHP10Q03435 203 aa1.1□□□□□ -2.23
PBP4YDL053C HPA2Q06592 156 aa1.1□□□□□ -2.23
PBP4YDL053C SCP1Q08873 200 aa1.1□□□□□ -2.23
PBP4YDL053C FIT3Q08907 204 aa1.1□□□□□ -2.23
PBP4YDL053C YGL194C-AQ2V2P6 80 aa1.1□□□□□ -2.23
PBP4YDL053C TAR1Q8TGM6 124 aa1.1□□□□□ -2.23
PBP4YDL053C TRM732Q03496 1420 aa1.09□□□□□ -2.23
PBP4YDL053C PAU19P0CE85 124 aa1.09□□□□□ -2.23
PBP4YDL053C YHR213WP0CI67 198 aa1.09□□□□□ -2.23
PBP4YDL053C PAU3P25610 124 aa1.09□□□□□ -2.23
PBP4YDL053C PAU24P38155 120 aa1.09□□□□□ -2.23
PBP4YDL053C ATG8P38182 117 aaRIP-Chip data1.09□□□□□ -2.23not detected
PBP4YDL053C SNU13P39990 126 aaKnown RBP1.09□□□□□ -2.23
PBP4YDL053C YFL065CP43539 102 aa1.09□□□□□ -2.23
PBP4YDL053C SNN1P48232 102 aa1.09□□□□□ -2.23
PBP4YDL053C YLR194CQ05777 254 aa1.09□□□□□ -2.23
PBP4YDL053C YLR296WQ05898 108 aa1.09□□□□□ -2.23
PBP4YDL053C PCC1Q3E833 88 aa1.09□□□□□ -2.23
PBP4YDL053C YRF1-3P0CX14 1859 aa1.09□□□□□ -2.24
PBP4YDL053C YRF1-7P0CX15 1859 aa1.09□□□□□ -2.24
PBP4YDL053C YRF1-6P53819 1859 aa1.09□□□□□ -2.24
PBP4YDL053C BNI1P41832 1953 aa1.08□□□□□ -2.24
PBP4YDL053C PFY1P07274 126 aa1.08□□□□□ -2.24
PBP4YDL053C YBR027CP38220 110 aa1.08□□□□□ -2.24
PBP4YDL053C COX23P38824 151 aa1.08□□□□□ -2.24
PBP4YDL053C YEL008WP40001 126 aa1.08□□□□□ -2.24
PBP4YDL053C EMC5P40540 141 aa1.08□□□□□ -2.24
PBP4YDL053C MSL1P40567 111 aaPredicted RBP1.08□□□□□ -2.24
PBP4YDL053C RPL37AP49166 88 aaKnown RBP1.08□□□□□ -2.24
PBP4YDL053C YDR029WQ12111 104 aa1.08□□□□□ -2.24
PBP4YDL053C REV3P14284 1504 aa1.08□□□□□ -2.24
PBP4YDL053C YGL014C-AP0C5N1 53 aa1.07□□□□□ -2.24
PBP4YDL053C YJL197C-AP0C5P0 93 aa1.07□□□□□ -2.24
PBP4YDL053C YHR212W-AP0CX91 67 aa1.07□□□□□ -2.24
PBP4YDL053C PAU16P35994 123 aa1.07□□□□□ -2.24
PBP4YDL053C SRX1P36077 127 aa1.07□□□□□ -2.24
PBP4YDL053C PAU15P40585 124 aa1.07□□□□□ -2.24
PBP4YDL053C LST8P41318 303 aa1.07□□□□□ -2.24
PBP4YDL053C SED1Q01589 338 aa1.07□□□□□ -2.24
PBP4YDL053C MIX14Q04341 121 aa1.07□□□□□ -2.24
PBP4YDL053C COA3Q3E7B2 85 aa1.07□□□□□ -2.24
PBP4YDL053C RPL33AP05744 107 aaKnown RBP1.06□□□□□ -2.24
PBP4YDL053C HMRA1P0CY11 126 aa1.06□□□□□ -2.24
PBP4YDL053C HMRA2P0CY13 119 aa1.06□□□□□ -2.24
PBP4YDL053C SRB6P32570 121 aa1.06□□□□□ -2.24
PBP4YDL053C YHR138CP38841 114 aaPredicted RBP1.06□□□□□ -2.24
PBP4YDL053C CYB5P40312 120 aa1.06□□□□□ -2.24
PBP4YDL053C YIR020CP40575 100 aa1.06□□□□□ -2.24
PBP4YDL053C RSM19P53733 91 aaPredicted RBP1.06□□□□□ -2.24
PBP4YDL053C YMR122CQ03879 124 aa1.06□□□□□ -2.24
PBP4YDL053C SEN15Q04675 128 aa1.06□□□□□ -2.24
PBP4YDL053C VAM10Q08474 114 aa1.06□□□□□ -2.24
PBP4YDL053C YLR363W-AQ3E747 85 aa1.06□□□□□ -2.24
PBP4YDL053C SUS1Q6WNK7 96 aa1.06□□□□□ -2.24
PBP4YDL053C RSF2P46974 1380 aa1.06□□□□□ -2.24
PBP4YDL053C TY3B-IQ7LHG5 1498 aaKnown RBP1.05□□□□□ -2.24
PBP4YDL053C ECM12O13529 151 aa1.05□□□□□ -2.24
PBP4YDL053C RPL22AP05749 121 aaKnown RBP1.05□□□□□ -2.24
PBP4YDL053C POR2P40478 281 aa1.05□□□□□ -2.24
PBP4YDL053C COA4Q05809 96 aa1.05□□□□□ -2.24
PBP4YDL053C YPR203WQ08994 102 aa1.05□□□□□ -2.24
PBP4YDL053C YLR285C-AQ3E771 56 aa1.05□□□□□ -2.24
PBP4YDL053C YSF3P0C074 85 aaPredicted RBP1.04□□□□□ -2.24
PBP4YDL053C YCL042WP25572 119 aa1.04□□□□□ -2.24
PBP4YDL053C AIM4P38305 123 aaPredicted RBP1.04□□□□□ -2.24
PBP4YDL053C YMR007WQ03675 126 aa1.04□□□□□ -2.24
PBP4YDL053C YMR082CQ04276 118 aa1.04□□□□□ -2.24
PBP4YDL053C IRC21Q04772 201 aa1.04□□□□□ -2.24
PBP4YDL053C PRM3Q08931 133 aa1.04□□□□□ -2.24
PBP4YDL053C RRT15Q3E811 62 aa1.04□□□□□ -2.24
PBP4YDL053C LAA1P39526 2014 aa1.04□□□□□ -2.24
PBP4YDL053C LTE1P07866 1435 aa1.04□□□□□ -2.24
PBP4YDL053C GSC2P40989 1895 aa1.03□□□□□ -2.24
PBP4YDL053C MYO1P08964 1928 aa1.03□□□□□ -2.24
PBP4YDL053C YHL005CP38752 130 aa1.03□□□□□ -2.24
PBP4YDL053C GCV3P39726 170 aaPredicted RBP1.03□□□□□ -2.24
PBP4YDL053C HUA1P40325 198 aa1.03□□□□□ -2.24
PBP4YDL053C YIL163CP40448 117 aa1.03□□□□□ -2.24
PBP4YDL053C PAU5P43575 122 aa1.03□□□□□ -2.24
PBP4YDL053C YDR042CQ03205 200 aa1.03□□□□□ -2.24
PBP4YDL053C LSM6Q06406 86 aaKnown RBP1.03□□□□□ -2.24
PBP4YDL053C RSM18P40033 138 aa1.02□□□□□ -2.25
PBP4YDL053C CWP2P43497 92 aa1.02□□□□□ -2.25
PBP4YDL053C ROM2P51862 1356 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms