RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	YDR034C-A	P0C289	58 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	HAP3	P13434	144 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	PCL1	P24867	279 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	ACB1	P31787	87 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	RPL14A	P36105	138 aa	Known RBP	0.9	□□□□□ -2.26
MSH3	YCR092C	PAM17	P36147	197 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	YKR070W	P36151	352 aa	Known RBP	0.9	□□□□□ -2.26
MSH3	YCR092C	RPL14B	P38754	138 aa	Known RBP	0.9	□□□□□ -2.26
MSH3	YCR092C	POG1	P40473	351 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	ARC15	P40518	154 aa	RIP-Chip data	0.9	□□□□□ -2.26	not detected
MSH3	YCR092C	CAX4	P53223	239 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	DYN2	Q02647	92 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	YDR114C	Q04597	100 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	YOR020W-A	Q3E824	90 aa		0.9	□□□□□ -2.26
MSH3	YCR092C	QCR8	P08525	94 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	RPS25B	P0C0T4	108 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	SEC72	P39742	193 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	YNL217W	P40152	326 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	YIL024C	P40543	189 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	PAU4	P53427	120 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	GIM5	Q04493	163 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	FCF1	Q05498	189 aa	Predicted RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	PBA1	Q05778	276 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	SHH4	Q06236	168 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	YJR112W-A	Q3E743	109 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	RPS25A	Q3E792	108 aa	Predicted RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	RPL24A	P04449	155 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	RPL31B	P0C2H9	113 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	MRPL31	P14063	131 aa	Predicted RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	SAR1	P20606	190 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	TOA2	P32774	122 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	YHR140W	P38842	239 aa		0.9	□□□□□ -2.27
MSH3	YCR092C	EDC2	P40023	145 aa	Predicted RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	RPL37B	P51402	88 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	YPL225W	Q08971	146 aa	Known RBP	0.9	□□□□□ -2.27
MSH3	YCR092C	NTF2	P33331	125 aa	Known RBP	0.89	□□□□□ -2.27
MSH3	YCR092C	YIL059C	P40520	121 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	IGD1	P43598	195 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	UBC12	P52491	188 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	DID2	P69771	204 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	DXO1	Q06349	442 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	ANT1	Q06497	328 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	YBL039W-B	P0C268	59 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	UBI4	P0CG63	381 aa	Known RBP	0.89	□□□□□ -2.27
MSH3	YCR092C	DER1	P38307	211 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	YIR035C	P40579	254 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	YFL067W	P43537	175 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	TVP18	Q04767	167 aa		0.89	□□□□□ -2.27
MSH3	YCR092C	NMA1	Q06178	401 aa	Known RBP	0.89	□□□□□ -2.27
MSH3	YCR092C	MRS4	P23500	304 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	FZF1	P32805	299 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	APS1	P35181	156 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	LOC1	P43586	204 aa	Predicted RBP	0.88	□□□□□ -2.27
MSH3	YCR092C	HAM1	P47119	197 aa	Known RBP	0.88	□□□□□ -2.27
MSH3	YCR092C	TOM7	P53507	60 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	DAD1	Q12248	94 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	PRM7	Q12459	698 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	YAL065C	O13511	128 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	GCN3	P14741	305 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	UBC4	P15731	148 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	YBL010C	P32788	280 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	GCV3	P39726	170 aa	Predicted RBP	0.88	□□□□□ -2.27
MSH3	YCR092C	PEX17	P40155	199 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	ARR3	Q06598	404 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	DGA1	Q08650	418 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	YOR011W-A	Q3E807	68 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	KSH1	Q8TGJ3	72 aa		0.88	□□□□□ -2.27
MSH3	YCR092C	TPI1	P00942	248 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
MSH3	YCR092C	PAU1	P0CE88	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU14	P0CE89	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU6	P0CE90	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU18	P0CE91	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU8	P0CE92	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU11	P0CE93	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	CNB1	P25296	175 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	TIP1	P27654	210 aa	Predicted RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	SPT4	P32914	102 aa	Predicted RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	PAU13	P38725	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	HAC1	P41546	238 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	CWC25	P53854	179 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	ODC1	Q03028	310 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU10	Q03050	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU20	Q08322	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PEX27	Q08580	376 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	HTZ1	Q12692	134 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	PAU9	Q3E770	120 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	FYV4	P38783	130 aa	Predicted RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	COX14	P39103	70 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PAU15	P40585	124 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	KNH1	P50112	268 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	ARL3	Q02804	198 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	MAK3	Q03503	176 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	CTR3	Q06686	241 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	RPL26A	P05743	127 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	YJL197C-A	P0C5P0	93 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	NHP6A	P11632	93 aa	Known RBP	0.87	□□□□□ -2.27
MSH3	YCR092C	YKR041W	P36134	250 aa		0.87	□□□□□ -2.27
MSH3	YCR092C	PET8	P38921	284 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms