RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	SUR2	P38992	349 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	APS2	Q00381	147 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	GPI19	Q04082	140 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	ORM2	Q06144	216 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	CRC1	Q12289	327 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	YLR118C	Q12354	227 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	YOP1	Q12402	180 aa		4.15	□□□□□ -1.75
ATG12	YBR217W	RPL27A	P0C2H6	136 aa	Known RBP	4.14	□□□□□ -1.75
ATG12	YBR217W	FRS1	P15624	595 aa	Known RBP	4.14	□□□□□ -1.75
ATG12	YBR217W	ZRT1	P32804	376 aa		4.14	□□□□□ -1.75
ATG12	YBR217W	SDH8	P38345	138 aa		4.14	□□□□□ -1.75
ATG12	YBR217W	MGA1	P53050	456 aa		4.14	□□□□□ -1.75
ATG12	YBR217W	ARC18	Q05933	178 aa	Known RBP	4.14	□□□□□ -1.75
ATG12	YBR217W	DGA1	Q08650	418 aa		4.14	□□□□□ -1.75
ATG12	YBR217W	SNU23	Q12368	194 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG12	YBR217W	IRC22	P40006	225 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	PAU15	P40585	124 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	DAN1	P47178	298 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	SDS23	P53172	527 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	TVP18	Q04767	167 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	GTO3	Q04806	366 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	ATG33	Q06485	197 aa		4.13	□□□□□ -1.75
ATG12	YBR217W	KTI12	P34253	313 aa	Known RBP	4.12	□□□□□ -1.75
ATG12	YBR217W	PAU7	P39545	55 aa		4.12	□□□□□ -1.75
ATG12	YBR217W	CDC40	P40968	455 aa	Predicted RBP	4.12	□□□□□ -1.75
ATG12	YBR217W	PAU5	P43575	122 aa		4.12	□□□□□ -1.75
ATG12	YBR217W	YPR195C	Q06594	109 aa		4.12	□□□□□ -1.75
ATG12	YBR217W	MRP10	O75012	95 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	RPL23A	P0CX41	137 aa	Known RBP	4.11	□□□□□ -1.75
ATG12	YBR217W	RPL23B	P0CX42	137 aa	Known RBP	4.11	□□□□□ -1.75
ATG12	YBR217W	YKR032W	P36127	104 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	YBR013C	P38215	129 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	TEM1	P38987	245 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	SPC1	P46965	94 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	POM33	Q12164	279 aa		4.11	□□□□□ -1.75
ATG12	YBR217W	NSE4	P43124	402 aa		4.1	□□□□□ -1.75
ATG12	YBR217W	YGR149W	P48236	432 aa		4.1	□□□□□ -1.75
ATG12	YBR217W	PMP3	P87284	55 aa		4.1	□□□□□ -1.75
ATG12	YBR217W	DPP1	Q05521	289 aa		4.1	□□□□□ -1.75
ATG12	YBR217W	FSF1	Q12029	327 aa	Known RBP	4.1	□□□□□ -1.75
ATG12	YBR217W	YLL066W-B	Q8TGJ7	56 aa		4.1	□□□□□ -1.75
ATG12	YBR217W	RPL42A	P0CX27	106 aa	Known RBP	4.09	□□□□□ -1.75
ATG12	YBR217W	RPL42B	P0CX28	106 aa	Known RBP	4.09	□□□□□ -1.75
ATG12	YBR217W	PET8	P38921	284 aa		4.09	□□□□□ -1.75
ATG12	YBR217W	DCV1	P43595	202 aa		4.09	□□□□□ -1.75
ATG12	YBR217W	PBA1	Q05778	276 aa		4.09	□□□□□ -1.75
ATG12	YBR217W	WIP1	Q2V2P8	89 aa		4.09	□□□□□ -1.75
ATG12	YBR217W	SEC4	P07560	215 aa	Known RBP	4.08	□□□□□ -1.76
ATG12	YBR217W	UBC5	P15732	148 aa		4.08	□□□□□ -1.76
ATG12	YBR217W	GAT4	P40569	121 aa		4.08	□□□□□ -1.76
ATG12	YBR217W	YJL028W	P47062	111 aa		4.08	□□□□□ -1.76
ATG12	YBR217W	YCR024C-B	Q3E7Z8	88 aa		4.08	□□□□□ -1.76
ATG12	YBR217W	SAL1	D6W196	494 aa		4.07	□□□□□ -1.76
ATG12	YBR217W	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
ATG12	YBR217W	POR1	P04840	283 aa	Known RBP	4.07	□□□□□ -1.76
ATG12	YBR217W	HHO1	P53551	258 aa		4.07	□□□□□ -1.76
ATG12	YBR217W	RRT15	Q3E811	62 aa		4.07	□□□□□ -1.76
ATG12	YBR217W	RTC6	O14464	93 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	RPL33A	P05744	107 aa	Known RBP	4.06	□□□□□ -1.76
ATG12	YBR217W	RPL11A	P0C0W9	174 aa	Known RBP	4.06	□□□□□ -1.76
ATG12	YBR217W	PAU19	P0CE85	124 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	PAU21	P0CE86	164 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	PAU22	P0CE87	164 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	PAU3	P25610	124 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	RPL33B	P41056	107 aa	Known RBP	4.06	□□□□□ -1.76
ATG12	YBR217W	GLO1	P50107	326 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	ZEO1	Q08245	113 aa		4.06	□□□□□ -1.76
ATG12	YBR217W	RPL11B	Q3E757	174 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG12	YBR217W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.06	□□□□□ -1.76
ATG12	YBR217W	ANB1	P19211	157 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	YBR209W	P38311	105 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	SVP26	P38869	228 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	YNL200C	P40165	246 aa	Known RBP	4.05	□□□□□ -1.76
ATG12	YBR217W	ARC15	P40518	154 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
ATG12	YBR217W	YIL059C	P40520	121 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	YGL088W	P53151	121 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	ERI1	P62651	68 aa	Known RBP	4.05	□□□□□ -1.76
ATG12	YBR217W	YMR122W-A	Q3E842	84 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	YPR014C	Q6B0W2	109 aa		4.05	□□□□□ -1.76
ATG12	YBR217W	YKR070W	P36151	352 aa	Known RBP	4.04	□□□□□ -1.76
ATG12	YBR217W	YER076C	P40049	302 aa		4.04	□□□□□ -1.76
ATG12	YBR217W	FCF1	Q05498	189 aa	Predicted RBP	4.04	□□□□□ -1.76
ATG12	YBR217W	PFY1	P07274	126 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	PRE1	P22141	198 aa	Known RBP	4.03	□□□□□ -1.76
ATG12	YBR217W	MRP49	P32388	137 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	GTT1	P40582	234 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	YIL014C-A	Q02598	104 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	YDR115W	Q04598	105 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	YMR320W	Q04897	101 aa		4.03	□□□□□ -1.76
ATG12	YBR217W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
ATG12	YBR217W	RPL16A	P26784	199 aa	Known RBP	4.02	□□□□□ -1.77
ATG12	YBR217W	AIM29	P36154	155 aa		4.02	□□□□□ -1.77
ATG12	YBR217W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
ATG12	YBR217W	CYT2	Q00873	224 aa		4.02	□□□□□ -1.77
ATG12	YBR217W	LCL2	Q08045	131 aa		4.02	□□□□□ -1.77
ATG12	YBR217W	AQY1	P0CD91	305 aa		4.01	□□□□□ -1.77
ATG12	YBR217W	YJR146W	P47174	117 aa		4.01	□□□□□ -1.77
ATG12	YBR217W	MGR2	Q02889	113 aa		4.01	□□□□□ -1.77
ATG12	YBR217W	YPR010C-A	A5Z2X5	72 aa		4	□□□□□ -1.77
ATG12	YBR217W	ADH2	P00331	348 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms