RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W CLB6P32943 380 aa1.92□□□□□ -2.1
SWD3YBR175W YHL042WP38729 150 aa1.92□□□□□ -2.1
SWD3YBR175W YGR269WP40326 108 aa1.92□□□□□ -2.1
SWD3YBR175W YMR252CQ04814 134 aa1.92□□□□□ -2.1
SWD3YBR175W IRC19Q07843 230 aa1.92□□□□□ -2.1
SWD3YBR175W FIT2Q08906 153 aa1.92□□□□□ -2.1
SWD3YBR175W YOR385WQ08909 290 aa1.92□□□□□ -2.1
SWD3YBR175W CSF1Q12150 2958 aa1.92□□□□□ -2.1
SWD3YBR175W MAK31P23059 88 aa1.91□□□□□ -2.1
SWD3YBR175W SPO73P40031 143 aa1.91□□□□□ -2.1
SWD3YBR175W CCS1P40202 249 aaKnown RBP1.91□□□□□ -2.1
SWD3YBR175W YJL144WP47009 104 aa1.91□□□□□ -2.1
SWD3YBR175W DIE2P50076 525 aa1.91□□□□□ -2.1
SWD3YBR175W CWC27Q02770 301 aa1.91□□□□□ -2.1
SWD3YBR175W SOM1Q05676 74 aa1.91□□□□□ -2.1
SWD3YBR175W KEI1Q06346 221 aa1.91□□□□□ -2.1
SWD3YBR175W YGL041W-AP0C5N3 154 aa1.9□□□□□ -2.11
SWD3YBR175W STF2P16965 84 aa1.9□□□□□ -2.11
SWD3YBR175W BUD23P25627 275 aaPredicted RBP1.9□□□□□ -2.11
SWD3YBR175W YAR029WP39549 74 aa1.9□□□□□ -2.11
SWD3YBR175W YGL230CP53074 147 aa1.9□□□□□ -2.11
SWD3YBR175W NMA1Q06178 401 aaKnown RBP1.9□□□□□ -2.11
SWD3YBR175W YDL157CQ12082 118 aa1.9□□□□□ -2.11
SWD3YBR175W YOR097CQ12274 175 aaPredicted RBP1.9□□□□□ -2.11
SWD3YBR175W YOR376W-AQ3E805 51 aa1.9□□□□□ -2.11
SWD3YBR175W NUP192P47054 1683 aa1.9□□□□□ -2.11
SWD3YBR175W YPR096CO13587 100 aa1.89□□□□□ -2.11
SWD3YBR175W COX5BP00425 151 aa1.89□□□□□ -2.11
SWD3YBR175W VAR1P02381 398 aa1.89□□□□□ -2.11
SWD3YBR175W FYV5P25585 152 aa1.89□□□□□ -2.11
SWD3YBR175W UTR5P32630 166 aa1.89□□□□□ -2.11
SWD3YBR175W QCR10P37299 77 aa1.89□□□□□ -2.11
SWD3YBR175W MPC1P53157 130 aaKnown RBP1.89□□□□□ -2.11
SWD3YBR175W MIX17Q03667 156 aa1.89□□□□□ -2.11
SWD3YBR175W ELP6Q04868 273 aa1.89□□□□□ -2.11
SWD3YBR175W SML1Q04964 104 aa1.89□□□□□ -2.11
SWD3YBR175W RAF1Q06891 181 aa1.89□□□□□ -2.11
SWD3YBR175W OCA6Q12454 224 aa1.89□□□□□ -2.11
SWD3YBR175W MDN1Q12019 4910 aaKnown RBP1.88□□□□□ -2.11
SWD3YBR175W SEC16P48415 2195 aaKnown RBP1.88□□□□□ -2.11
SWD3YBR175W MDM35O60200 86 aa1.88□□□□□ -2.11
SWD3YBR175W TMA19P35691 167 aaKnown RBP1.88□□□□□ -2.11
SWD3YBR175W SRL3P36167 246 aa1.88□□□□□ -2.11
SWD3YBR175W BAT2P47176 376 aaKnown RBP1.88□□□□□ -2.11
SWD3YBR175W YCL001W-AP87012 153 aa1.88□□□□□ -2.11
SWD3YBR175W RTR2Q12378 196 aa1.88□□□□□ -2.11
SWD3YBR175W PRM7Q12459 698 aa1.88□□□□□ -2.11
SWD3YBR175W YDL012CQ12489 107 aa1.88□□□□□ -2.11
SWD3YBR175W YMR030W-AQ3E760 96 aa1.88□□□□□ -2.11
SWD3YBR175W TRA1P38811 3744 aa1.88□□□□□ -2.11
SWD3YBR175W RPS25BP0C0T4 108 aaKnown RBP1.87□□□□□ -2.11
SWD3YBR175W YKR045CP36138 183 aa1.87□□□□□ -2.11
SWD3YBR175W DSE2P38844 325 aa1.87□□□□□ -2.11
SWD3YBR175W RCE1Q03530 315 aa1.87□□□□□ -2.11
SWD3YBR175W YPR153WQ06537 140 aa1.87□□□□□ -2.11
SWD3YBR175W ZEO1Q08245 113 aa1.87□□□□□ -2.11
SWD3YBR175W RPS25AQ3E792 108 aaPredicted RBP1.87□□□□□ -2.11
SWD3YBR175W RIF1P29539 1916 aa1.87□□□□□ -2.11
SWD3YBR175W RIM15P43565 1770 aa1.87□□□□□ -2.11
SWD3YBR175W FKS3Q04952 1785 aa1.87□□□□□ -2.11
SWD3YBR175W YCR099CP25657 155 aa1.86□□□□□ -2.11
SWD3YBR175W HPA3P39979 161 aa1.86□□□□□ -2.11
SWD3YBR175W PAM16P42949 149 aa1.86□□□□□ -2.11
SWD3YBR175W YHR007C-AQ07074 71 aa1.86□□□□□ -2.11
SWD3YBR175W GTT2Q12390 233 aa1.86□□□□□ -2.11
SWD3YBR175W APC1P53886 1748 aa1.86□□□□□ -2.11
SWD3YBR175W FIG2P25653 1609 aa1.85□□□□□ -2.11
SWD3YBR175W MRPL44P19956 98 aa1.85□□□□□ -2.11
SWD3YBR175W YKL044WP36092 106 aa1.85□□□□□ -2.11
SWD3YBR175W GNA1P43577 159 aaPredicted RBP1.85□□□□□ -2.11
SWD3YBR175W YFR035CP43608 114 aa1.85□□□□□ -2.11
SWD3YBR175W HRT1Q08273 121 aa1.85□□□□□ -2.11
SWD3YBR175W CMC4Q3E7A9 73 aa1.85□□□□□ -2.11
SWD3YBR175W FAS2P19097 1887 aaKnown RBP1.84□□□□□ -2.11
SWD3YBR175W SEC59P20048 519 aa1.84□□□□□ -2.11
SWD3YBR175W RPB7P34087 171 aa1.84□□□□□ -2.11
SWD3YBR175W YBR090CP38253 122 aa1.84□□□□□ -2.11
SWD3YBR175W SNF11P38956 169 aa1.84□□□□□ -2.11
SWD3YBR175W DAN1P47178 298 aa1.84□□□□□ -2.11
SWD3YBR175W ERV14P53173 138 aa1.84□□□□□ -2.11
SWD3YBR175W AVO2Q04749 426 aa1.84□□□□□ -2.11
SWD3YBR175W YCL001W-BQ96VH2 84 aa1.84□□□□□ -2.11
SWD3YBR175W HAP2P06774 265 aa1.83□□□□□ -2.12
SWD3YBR175W HAP3P13434 144 aa1.83□□□□□ -2.12
SWD3YBR175W IPT1P38954 527 aa1.83□□□□□ -2.12
SWD3YBR175W YEL014CP39999 101 aa1.83□□□□□ -2.12
SWD3YBR175W HYR1P40581 163 aaKnown RBP1.83□□□□□ -2.12
SWD3YBR175W YGR164WP53291 111 aa1.83□□□□□ -2.12
SWD3YBR175W MET31Q03081 177 aa1.83□□□□□ -2.12
SWD3YBR175W NAT5Q08689 176 aa1.83□□□□□ -2.12
SWD3YBR175W FLO9P39712 1322 aa1.83□□□□□ -2.12
SWD3YBR175W LYS2P07702 1392 aa1.83□□□□□ -2.12
SWD3YBR175W PAU21P0CE86 164 aa1.82□□□□□ -2.12
SWD3YBR175W PAU22P0CE87 164 aa1.82□□□□□ -2.12
SWD3YBR175W UBC5P15732 148 aa1.82□□□□□ -2.12
SWD3YBR175W HSP150P32478 413 aa1.82□□□□□ -2.12
SWD3YBR175W EMP24P32803 203 aaKnown RBP1.82□□□□□ -2.12
SWD3YBR175W ECM31P38122 312 aa1.82□□□□□ -2.12
SWD3YBR175W YEA6P39953 335 aa1.82□□□□□ -2.12
SWD3YBR175W TDA2P40045 126 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms