RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CLNKQ7Z7G1 428 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 WDR49Q8IV35 697 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 FAM71DQ8N9W8 422 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 ATP11CQ8NB49 1132 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 PRPF31Q8WWY3 499 aaKnown RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 PRR11Q96HE9 360 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 FAM167BQ9BTA0 163 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 E7ESA3 106 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 MSCO60682 206 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 NIFKQ9BYG3 293 aaKnown RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 TMEM134Q9H6X4 195 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 POLIQ9UNA4 740 aa14.5□□□□□ -0.09
PHGDH-233ENST00000642021 MYH9P35579 1960 aaKnown RBP14.5□□□□□ -0.09
PHGDH-233ENST00000642021 TRAFD1O14545 582 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 ASPAP45381 313 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 RAP1GAPP47736 663 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 TFAMQ00059 246 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 TARBP2Q15633 366 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 BBS12Q6ZW61 710 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 POLNQ7Z5Q5 900 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 PALM2Q8IXS6 379 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 ZNF280CQ8ND82 737 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 RSAD2Q8WXG1 361 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 NUDCD1Q96RS6 583 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 ZNF518BQ9C0D4 1074 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 XYLT2Q9H1B5 865 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 SSU72Q9NP77 194 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 BATF3Q9NR55 127 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 PCDHGC3Q9UN70 934 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 CHMP2BQ9UQN3 213 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 A0A0G2JND7 137 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 SIGLEC16A6NMB1 481 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 PTPRAP18433 802 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 RAD23BP54727 409 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 TAF11Q15544 211 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 SGSM1Q2NKQ1 1148 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 CIAPIN1Q6FI81 312 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 RFWD3Q6PCD5 774 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 PCGF5Q86SE9 256 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 CDR2LQ86X02 465 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 NAF1Q96HR8 494 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 ZNF668Q96K58 619 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 CPXM1Q96SM3 734 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 ACAD9Q9H845 621 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 PPCSQ9HAB8 311 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 GINM1Q9NU53 330 aa14.49□□□□□ -0.09
PHGDH-233ENST00000642021 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 XPO7Q9UIA9 1087 aaKnown RBP14.49□□□□□ -0.09
PHGDH-233ENST00000642021 STAM2O75886 525 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 UPP2O95045 317 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 SRGAP2CP0DJJ0 459 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 CD19P15391 556 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 PTPN4P29074 926 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 PHBP35232 272 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 CDH8P55286 799 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 OSTNP61366 133 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 TAP1Q03518 808 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 DUOXA2Q1HG44 320 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 RAB6CQ53S08 254 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 ZC3H12AQ5D1E8 599 aaKnown RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 TEX13BQ9BXU2 312 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 RAB6CQ9H0N0 254 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 MANSC1Q9H8J5 431 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 IGKV6D-21A0A0A0MT36 114 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 C2orf71A6NGG8 1288 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 PPP1R12AO14974 1030 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 TOM1L1O75674 476 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 PSMC1P62191 440 aaKnown RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 BASP1P80723 227 aaKnown RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 SEPT7Q16181 437 aaKnown RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 TAZQ16635 292 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 NPNTQ6UXI9 565 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 CADM1Q9BY67 442 aaKnown RBP14.48□□□□□ -0.09
PHGDH-233ENST00000642021 KCNK13Q9HB14 408 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 ARL8BQ9NVJ2 186 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 HEY2Q9UBP5 337 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 FETUBQ9UGM5 382 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 LRRC42Q9Y546 428 aa14.48□□□□□ -0.09
PHGDH-233ENST00000642021 CFAP69A5D8W1 941 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ABLIM1O14639 778 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 AVILO75366 819 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 HOXC6P09630 235 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ELK3P41970 407 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 OAZ1P54368 228 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 TRPC3Q13507 836 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 TNFAIP1Q13829 316 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 DPYSL3Q14195 570 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 STXBP2Q15833 593 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ACO2Q99798 780 aaKnown RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 TLE6Q9H808 572 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 FBXO6Q9NRD1 293 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 METTL5Q9NRN9 209 aaKnown RBP14.47□□□□□ -0.09
PHGDH-233ENST00000642021 EFR3BQ9Y2G0 817 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ETV4P43268 484 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 FAAP100Q0VG06 881 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 KLHL38Q2WGJ6 581 aa14.47□□□□□ -0.09
PHGDH-233ENST00000642021 ZNF699Q32M78 642 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms