RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 LPIN3Q9BQK8 851 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 SAE1Q9UBE0 346 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-226ENST00000641756 SLC12A6Q9UHW9 1150 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 HAS3O00219 553 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 HCRTO43612 131 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 GRAP2O75791 330 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 KRT7P08729 469 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 MIPP30301 263 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 CCT5P48643 541 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 CPT1AP50416 773 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 CAV1Q03135 178 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 RAB6CQ53S08 254 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 SH3PXD2AQ5TCZ1 1133 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 USP6NLQ92738 828 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 RAB6CQ9H0N0 254 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
PHGDH-226ENST00000641756 MANSC4A6NHS7 340 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-226ENST00000641756 RGS16O15492 202 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-226ENST00000641756 KDELR1P24390 212 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 IFI35P80217 286 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-226ENST00000641756 PLCB3Q01970 1234 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 LMNB2Q03252 620 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 C9orf57Q5W0N0 161 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 TRNP1Q6NT89 227 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 ALKAL1Q6UXT8 129 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 TTC39CQ8N584 583 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 ALLCQ8N6M5 410 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 HSPH1Q92598 858 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 CNTN3Q9P232 1028 aa18.78■□□□□ 0.6
PHGDH-226ENST00000641756 SEC24CP53992 1094 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 PTGISQ16647 500 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 KYNUQ16719 465 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 DRICH1Q6PGQ1 229 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-226ENST00000641756 C17orf99Q6UX52 265 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 SESTD1Q86VW0 696 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 TTC30AQ86WT1 665 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 OR6B3Q8NGW1 331 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 PGM2Q96G03 612 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 TMEM121Q9BTD3 319 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 C10orf88Q9H8K7 445 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 KIAA1257Q9ULG3 409 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 RASGRF2O14827 1237 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 RNF8O76064 485 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 RGS2P41220 211 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 ARSEP51690 589 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 VCPP55072 806 aaKnown RBP18.77■□□□□ 0.6
PHGDH-226ENST00000641756 OASLQ15646 514 aaKnown RBP18.77■□□□□ 0.6
PHGDH-226ENST00000641756 LONRF1Q17RB8 773 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 C15orf59Q2T9L4 293 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-226ENST00000641756 C6orf118Q5T5N4 469 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 PMF1Q6P1K2 205 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 KCTD6Q8NC69 237 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 BBOF1Q8ND07 529 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 RXFP2Q8WXD0 754 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 DPEP3Q9H4B8 488 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 PPANQ9NQ55 473 aaKnown RBP18.77■□□□□ 0.6
PHGDH-226ENST00000641756 USP18Q9UMW8 372 aa18.77■□□□□ 0.6
PHGDH-226ENST00000641756 C17orf102A2RUQ5 167 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 CST8O60676 142 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 TRUB2O95900 331 aaKnown RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 GPD1P21695 349 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 CDO1Q16878 200 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 HIBCHQ6NVY1 386 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 MDM1Q8TC05 714 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 PEBP4Q96S96 227 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 EPN3Q9H201 632 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 GOLGA2P5Q9HBQ8 144 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 ASNSD1Q9NWL6 643 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 NINJ2Q9NZG7 142 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 UBQLN1Q9UMX0 589 aaKnown RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 SGK1O00141 431 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 NDUFAB1O14561 156 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 ZNF143P52747 638 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 OTUD4Q01804 1114 aaKnown RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 GPS1Q13098 491 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 IRF5Q13568 498 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 PCBP1Q15365 356 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■■■□□ 14.6
PHGDH-226ENST00000641756 FSCN1Q16658 493 aaKnown RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 UBXN11Q5T124 520 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 LRRC52Q8N7C0 313 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 ACTL9Q8TC94 416 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 TMEM109Q9BVC6 243 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 ADAM7Q9H2U9 754 aa18.76■□□□□ 0.59
PHGDH-226ENST00000641756 FAM124BQ9H5Z6 455 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 DRG1Q9Y295 367 aaKnown RBP18.76■□□□□ 0.59
PHGDH-226ENST00000641756 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 C2CD4BA6NLJ0 364 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
PHGDH-226ENST00000641756 TTC4O95801 387 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 IFNB1P01574 187 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 PDGFRAP16234 1089 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 AXLP30530 894 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 AUHQ13825 339 aaKnown RBP18.75■□□□□ 0.59
PHGDH-226ENST00000641756 RFX6Q8HWS3 928 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 IFNL1Q8IU54 200 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 SLC35B2Q8TB61 432 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 NKD2Q969F2 451 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms