RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PTPRHQ9HD43 1115 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 KLHL14Q9P2G3 628 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 ANK1P16157 1881 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 ADM5C9JUS6 153 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 TARSP26639 723 aaKnown RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 MIPP30301 263 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 BASP1P80723 227 aaKnown RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 C15orf59Q2T9L4 293 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 C3orf62Q6ZUJ4 267 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 CENPUQ71F23 418 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 PCDH9Q9HC56 1237 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 KCNG1Q9UIX4 513 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 CHMP2BQ9UQN3 213 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 CHKBQ9Y259 395 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 DRG1Q9Y295 367 aaKnown RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 ABCD1P33897 745 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 MAP2K2P36507 400 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 EFNA5P52803 228 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 NEDD9Q14511 834 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 IER5Q5VY09 327 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 MAP1SQ66K74 1059 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-223ENST00000641597 JADE1Q6IE81 842 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 LVRNQ6Q4G3 990 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 MPZL3Q6UWV2 235 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 PPP1R21Q6ZMI0 780 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 RFX6Q8HWS3 928 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 APOBEC3FQ8IUX4 373 aaKnown RBP17.65■□□□□ 0.42
PHGDH-223ENST00000641597 ZBTB8OSQ8IWT0 167 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 SLC4A11Q8NBS3 891 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 FBF1Q8TES7 1133 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 UTP4Q969X6 686 aaKnown RBP17.65■□□□□ 0.42
PHGDH-223ENST00000641597 SPATA33Q96N06 139 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 SMC6Q96SB8 1091 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 UBN1Q9NPG3 1134 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 GPATCH2LQ9NWQ4 482 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 SLC17A7Q9P2U7 560 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 PCDHGC3Q9UN70 934 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 WDR90Q96KV7 1748 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 SIGLEC16A6NMB1 481 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 LACTBL1A8MY62 500 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 CDH5P33151 784 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-223ENST00000641597 FAXCQ5TGI0 409 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 C12orf29Q8N999 325 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 KCTD6Q8NC69 237 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 PYROXD1Q8WU10 500 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 TRIM56Q9BRZ2 755 aaKnown RBP17.65■□□□□ 0.42
PHGDH-223ENST00000641597 ELP3Q9H9T3 547 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 CEP83Q9Y592 693 aa17.65■□□□□ 0.42
PHGDH-223ENST00000641597 M0QYV0 167 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 TYROBPO43914 113 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 TNNC2P02585 160 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 PROZP22891 400 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 MYO1EQ12965 1108 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 PLEKHG4Q58EX7 1191 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 WLSQ5T9L3 541 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF449Q6P9G9 518 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 RIOX2Q8IUF8 465 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 NAT8LQ8N9F0 302 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 RSAD2Q8WXG1 361 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 ETNK1Q9HBU6 452 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 HAO1Q9UJM8 370 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 ECM2O94769 699 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-223ENST00000641597 MICAL2O94851 1124 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 CYP3A5P20815 502 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 CCDC91Q7Z6B0 441 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 AGGF1Q8N302 714 aaeCLIP17.64■□□□□ 0.41
PHGDH-223ENST00000641597 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 PAFAH2Q99487 392 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 MAGEB5Q9BZ81 275 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 SHOC2Q9UQ13 582 aa17.64■□□□□ 0.41
PHGDH-223ENST00000641597 CBX6O95503 412 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 RGS7P49802 495 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 MBTD1Q05BQ5 628 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF667Q5HYK9 610 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 SPATA18Q8TC71 538 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 PTPRN2Q92932 1015 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 KCNN1Q92952 543 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 LPIN3Q9BQK8 851 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 XPO7Q9UIA9 1087 aaKnown RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 MCM8Q9UJA3 840 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 DCTN4Q9UJW0 460 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ACTL7BQ9Y614 415 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 PTPRFP10586 1907 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ACKR2O00590 384 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 FAM155BO75949 473 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 RBP3P10745 1247 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 CDC25CP30307 473 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 GSCP56915 257 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 EIF3EP60228 445 aaKnown RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 YWHAEP62258 255 aaKnown RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ATP11AP98196 1134 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 MOGSQ13724 837 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 SPARCL1Q14515 664 aa17.63■□□□□ 0.41
PHGDH-223ENST00000641597 ZNF268Q14587 947 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 FAM102AQ5T9C2 384 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-223ENST00000641597 C1orf228Q6PIY5 440 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms