RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 SPOPLQ6IQ16 392 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 KATNAL2Q8IYT4 538 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 PPM1KQ8N3J5 372 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 RDH13Q8NBN7 331 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 SLC20A1Q8WUM9 679 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 TLR10Q9BXR5 811 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 HES2Q9Y543 173 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 DAB1O75553 588 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 PROSCO94903 275 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 NPR3P17342 541 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 CYP2C18P33260 490 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 MAGEA1P43355 309 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 SMAD3P84022 425 aaKnown RBP6.56□□□□□ -1.36
RGPD1-206ENST00000641458 RAPGEF1Q13905 1077 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 PTPN20Q4JDL3 420 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 HERC6Q8IVU3 1022 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 SLC22A17Q8WUG5 538 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.56□□□□□ -1.36
RGPD1-206ENST00000641458 NPY6RQ99463 290 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 PARVAQ9NVD7 372 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 COG5Q9UP83 839 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 RAD54BQ9Y620 910 aa6.56□□□□□ -1.36
RGPD1-206ENST00000641458 CEP350Q5VT06 3117 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 C3orf70A6NLC5 250 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CYB561D2O14569 222 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 HUS1O60921 280 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 MSNP26038 577 aaKnown RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 GNL1P36915 607 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 BCAR1P56945 870 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 RING1Q06587 406 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 KLF1Q13351 362 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 PIGHQ14442 188 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 FAM47CQ5HY64 1035 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 OTUD1Q5VV17 481 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CLEC20AQ6ZU45 233 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 BCL7CQ8WUZ0 217 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CDCA3Q99618 268 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 AFF4Q9UHB7 1163 aaKnown RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 HAPLN1P10915 354 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 SEZ6Q53EL9 994 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 SMARCD1Q96GM5 515 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 PBKQ96KB5 322 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 PI4K2AQ9BTU6 479 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 NLRC4Q9NPP4 1024 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 EHD2Q9NZN4 543 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 HMGXB4Q9UGU5 601 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 FGBP02675 491 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 ALDH2P05091 517 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 EN2P19622 333 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 KIF5AQ12840 1032 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CCDC142Q17RM4 750 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 MANEALQ5VSG8 457 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 FUT10Q6P4F1 479 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 DCP1BQ8IZD4 617 aaKnown RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 MSANTD4Q8NCY6 345 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 SNX12Q9UMY4 172 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 TRIM66O15016 1216 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 TCP1P17987 556 aaKnown RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 EPHB4P54760 987 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 LRIT3Q3SXY7 679 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 TPRNQ4KMQ1 711 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.55□□□□□ -1.36
RGPD1-206ENST00000641458 OR10T2Q8NGX3 314 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 ABHD8Q96I13 439 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 SMOQ99835 787 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 AAASQ9NRG9 546 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 MRFAP1Q9Y605 127 aa6.55□□□□□ -1.36
RGPD1-206ENST00000641458 PQBP1O60828 265 aaKnown RBP6.54□□□□□ -1.36
RGPD1-206ENST00000641458 FYNP06241 537 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 TNFAIP3P21580 790 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 SLC25A11Q02978 314 aaKnown RBP6.54□□□□□ -1.36
RGPD1-206ENST00000641458 GFPT1Q06210 699 aaPredicted RBP6.54□□□□□ -1.36
RGPD1-206ENST00000641458 BIRC3Q13489 604 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
RGPD1-206ENST00000641458 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 MMS22LQ6ZRQ5 1243 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 FAM35AQ86V20 835 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 LEMD2Q8NC56 503 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 RTP4Q96DX8 246 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 SLC39A13Q96H72 371 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 SYT15Q9BQS2 421 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 NEU3Q9UQ49 428 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 PCDHB4Q9Y5E5 795 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 USP27XA6NNY8 438 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 CSF2RAP15509 400 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 TKTP29401 623 aaKnown RBP6.54□□□□□ -1.36
RGPD1-206ENST00000641458 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 SPA17Q15506 151 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 WHAMMP3Q1A5X7 153 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 HSP90AA4PQ58FG1 418 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 TMEM270Q6UE05 265 aa6.54□□□□□ -1.36
RGPD1-206ENST00000641458 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms