RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PCDHA3Q9Y5H8 950 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 SASH3O75995 380 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 PBX1P40424 430 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 HYIQ5T013 277 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 TRPV6Q9H1D0 765 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 THPOP40225 353 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FOXR2Q6PJQ5 311 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 TMEM161BQ8NDZ6 487 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 KCNV2Q8TDN2 545 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 CCDC124Q96CT7 223 aaKnown RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ZNF512Q96ME7 567 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 CATSPERBQ9H7T0 1116 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 CCT8L1PA6NM43 557 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 VGLL4Q14135 290 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ARSHQ5FYA8 562 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FBXW10Q5XX13 1052 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FAM131BQ86XD5 332 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 LRRC34Q8IZ02 419 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ZNF384Q8TF68 577 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ULK4Q96C45 1275 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 HAUS8Q9BT25 410 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ACP6Q9NPH0 428 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 AVENQ9NQS1 362 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 C20orf96Q9NUD7 363 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 CPA4Q9UI42 421 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 GRID1Q9ULK0 1009 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 RNF225M0QZC1 329 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 CYB561D2O14569 222 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 SMIM24O75264 130 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FBXO47Q5MNV8 452 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FBXO36Q8NEA4 188 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 IPMKQ8NFU5 416 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 ZBTB18Q99592 522 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 PDHXO00330 501 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 KIF3CO14782 793 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 RARAP10276 462 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 SATB1Q01826 763 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 MGAT5BQ3V5L5 792 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 MAP1SQ66K74 1059 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 WDCPQ9H6R7 721 aa18.3■□□□□ 0.52
SCARB2-223ENST00000640640 BARX2Q9UMQ3 279 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-223ENST00000640640 FAM153BP0C7A2 387 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ALDH18A1P54886 795 aaKnown RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 FAM153CQ494X1 144 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TTC39BQ5VTQ0 682 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 PGM1P36871 562 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 NNMTP40261 264 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 CDH8P55286 799 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 GRIK4Q16099 956 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 PCSK7Q16549 785 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 PPFIA2O75334 1257 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ACCSLQ4AC99 568 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 NAPEPLDQ6IQ20 393 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TAS2R42Q7RTR8 314 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ADGRF2Q8IZF7 708 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ADA2Q9NZK5 511 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TSPAN16Q9UKR8 245 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TCHHQ07283 1943 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ADRB2P07550 413 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 NDST1P52848 882 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 RAD51Q06609 339 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ELMSAN1Q6PJG2 1045 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 PIP4K2CQ8TBX8 421 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 SNTG2Q9NY99 539 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ABI2Q9NYB9 513 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-223ENST00000640640 TAS2R14Q9NYV8 317 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 ITGA11Q9UKX5 1188 aa18.29■□□□□ 0.52
SCARB2-223ENST00000640640 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
SCARB2-223ENST00000640640 KBTBD13C9JR72 458 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 ENO1P06733 434 aaKnown RBP18.28■□□□□ 0.52
SCARB2-223ENST00000640640 ODC1P11926 461 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 YY1P25490 414 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 TASP1Q9H6P5 420 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 GPR182O15218 404 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 UPP2O95045 317 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 ADORA2AP29274 412 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 BMT2Q1RMZ1 405 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 RFX8Q6ZV50 586 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 EGFL8Q99944 293 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 SUDS3Q9H7L9 328 aaPredicted RBP18.28■□□□□ 0.52
SCARB2-223ENST00000640640 VTA1Q9NP79 307 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 GFAPP14136 432 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 RAD23BP54727 409 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 PAN2Q504Q3 1202 aaKnown RBP18.28■□□□□ 0.52
SCARB2-223ENST00000640640 AENQ8WTP8 325 aaKnown RBP18.28■□□□□ 0.52
SCARB2-223ENST00000640640 MANSC1Q9H8J5 431 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 GPRC5DQ9NZD1 345 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 AP4E1Q9UPM8 1137 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 RPS6KL1Q9Y6S9 549 aa18.28■□□□□ 0.52
SCARB2-223ENST00000640640 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms