RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 APOL2Q9BQE5 337 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 HEY2Q9UBP5 337 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 DDX20Q9UHI6 824 aaKnown RBP15.02■□□□□ -0
SCARB2-216ENST00000639300 HAO1Q9UJM8 370 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 DNPEPQ9ULA0 475 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 GOLGA4Q13439 2230 aaKnown RBP15.02■□□□□ -0
SCARB2-216ENST00000639300 H3BRB1 525 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 ADCY3O60266 1144 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 B3GAT3O94766 335 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 POLBP06746 335 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 MCL1Q07820 350 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.02■□□□□ -0
SCARB2-216ENST00000639300 DAB2IPQ5VWQ8 1189 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 NIPA1Q7RTP0 329 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 SAMD3Q8N6K7 520 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 TMEM176AQ96HP8 235 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 INPP4AQ96PE3 977 aaPredicted RBP15.02■□□□□ -0
SCARB2-216ENST00000639300 ZNF518BQ9C0D4 1074 aa15.02■□□□□ -0
SCARB2-216ENST00000639300 TUT1Q9H6E5 874 aaKnown RBP15.02■□□□□ -0
SCARB2-216ENST00000639300 SNX2O60749 519 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 ZSCAN5DPP0CG00 497 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 PTGER2P43116 358 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 ACADSBP45954 432 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 MFSD14CQ5VZR4 134 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 ST13P4Q8IZP2 240 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 MTBPQ96DY7 904 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 CCDC138Q96M89 665 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 PAFAH2Q99487 392 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 UBQLN1Q9UMX0 589 aaKnown RBP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 ENO3P13929 434 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 PECAM1P16284 738 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 SATB1Q01826 763 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 ATP13A4Q4VNC1 1196 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 TSC22D3Q99576 134 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 OSMRQ99650 979 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 TRPV6Q9H1D0 765 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 NOD2Q9HC29 1040 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 SAE1Q9UBE0 346 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-216ENST00000639300 SLC39A10Q9ULF5 831 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 GRID1Q9ULK0 1009 aa15.02□□□□□ -0.01
SCARB2-216ENST00000639300 CACNA1FO60840 1977 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 RNF103-CHMP3A0A140T963 221 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 FAM200BP0CF97 657 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 SPRP35270 261 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-216ENST00000639300 NLRP9Q7RTR0 991 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 ATPAF2Q8N5M1 289 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 MRIQ9BWK5 157 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 PMPCBO75439 489 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 SV2CQ496J9 727 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 DENND5BQ6ZUT9 1274 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 DDIASQ8IXT1 998 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-216ENST00000639300 SMAPO00193 183 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 PIK3CDO00329 1044 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 AIM2O14862 343 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 ZNF286BP0CG31 522 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 EFTUD2Q15029 972 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCARB2-216ENST00000639300 TTC39BQ5VTQ0 682 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-216ENST00000639300 SLC25A41Q8N5S1 370 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 TMEM161BQ8NDZ6 487 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 URGCPQ8TCY9 931 aa15.01□□□□□ -0.01
SCARB2-216ENST00000639300 GFAPP14136 432 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 PCSK1P29120 753 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 VCPP55072 806 aaKnown RBP15□□□□□ -0.01
SCARB2-216ENST00000639300 BMPR2Q13873 1038 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 NFIL3Q16649 462 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 FRA10AC1Q70Z53 315 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 TJP2Q9UDY2 1190 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 CES2O00748 559 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 AP1ARQ63HQ0 302 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 TFB1MQ8WVM0 346 aaKnown RBP15□□□□□ -0.01
SCARB2-216ENST00000639300 ALG3Q92685 438 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 CEP41Q9BYV8 373 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 SETD4Q9NVD3 440 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 SALL4Q9UJQ4 1053 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 E5RI56 91 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 SNHG28P0DPA3 235 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 PRELID2Q8N945 189 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 PARK7Q99497 189 aaKnown RBP15□□□□□ -0.01
SCARB2-216ENST00000639300 MTO1Q9Y2Z2 717 aaKnown RBP15□□□□□ -0.01
SCARB2-216ENST00000639300 L3MBTL1Q9Y468 752 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 TGFB3P10600 412 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 YY1P25490 414 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 NDST1P52848 882 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 HUNKP57058 714 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 GTF2BQ00403 316 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 ZNF484Q5JVG2 852 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 DNERQ8NFT8 737 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 XAB2Q9HCS7 855 aaKnown RBP15□□□□□ -0.01
SCARB2-216ENST00000639300 FAM8A1Q9UBU6 413 aa15□□□□□ -0.01
SCARB2-216ENST00000639300 LSM8O95777 96 aaKnown RBP14.99□□□□□ -0.01
SCARB2-216ENST00000639300 SHBGP04278 402 aa14.99□□□□□ -0.01
SCARB2-216ENST00000639300 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
SCARB2-216ENST00000639300 FKBP1CQ5VVH2 108 aa14.99□□□□□ -0.01
SCARB2-216ENST00000639300 CAPRIN2Q6IMN6 1127 aaKnown RBP14.99□□□□□ -0.01
SCARB2-216ENST00000639300 TAS2R42Q7RTR8 314 aa14.99□□□□□ -0.01
SCARB2-216ENST00000639300 BRSK2Q8IWQ3 736 aa14.99□□□□□ -0.01
SCARB2-216ENST00000639300 MRPL46Q9H2W6 279 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms