RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
NECAP1-212ENST00000638787 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-212ENST00000638787 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
NECAP1-212ENST00000638787 MYH10P35580 1976 aa9.42□□□□□ -0.9
NECAP1-212ENST00000638787 BECN2A8MW95 431 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 F8VP50 259 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ZNF197O14709 1029 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 TRIM66O15016 1216 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CAVIN2O95810 425 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CSH1P0DML2 217 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CSH2P0DML3 217 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 MYL4P12829 197 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ATP1A3P13637 1013 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 GBP2P32456 591 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SSTR3P32745 418 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 GRIK1P39086 918 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CCR2P41597 374 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CACNA2D1P54289 1103 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 APBA1Q02410 837 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 TAF12Q16514 161 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 PRSS36Q5K4E3 855 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 GJB7Q6PEY0 223 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 TMEM270Q6UE05 265 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 GJD3Q8N144 294 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 LEMD2Q8NC56 503 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 STKLD1Q8NE28 680 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ING5Q8WYH8 240 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SPATA17Q96L03 361 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 MYADMQ96S97 322 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SIX2Q9NPC8 291 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 APEX2Q9UBZ4 518 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 PCDHB4Q9Y5E5 795 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 GREB1Q4ZG55 1949 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SLC38A8A6NNN8 435 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 NRG2O14511 850 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 AP1G2O75843 785 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 NOL4O94818 638 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 HMGA1P17096 107 aaKnown RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CEBPBP17676 345 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ANXA13P27216 316 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ADORA2BP29275 332 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 MFAP3P55082 362 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 MTMR3Q13615 1198 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 FKBP15Q5T1M5 1219 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 ENOSF1Q7L5Y1 443 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CYFIP2Q96F07 1278 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 SMARCD1Q96GM5 515 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CEP295NLQ96MC4 621 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 HNRNPABQ99729 332 aaKnown RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CD320Q9NPF0 282 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.41□□□□□ -0.9
NECAP1-212ENST00000638787 CDH7Q9ULB5 785 aa9.41□□□□□ -0.9
NECAP1-212ENST00000638787 LRRC10BA6NIK2 292 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 LGALS16A8MUM7 142 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 MOSPD3O75425 235 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 FGF19O95750 216 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 PAEPP09466 180 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 FAM200BP0CF97 657 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 ARHGAP17Q68EM7 881 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 DPY19L2P1Q6NXN4 242 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 GAREM2Q75VX8 874 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 APTXQ7Z2E3 356 aaKnown RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 LUZP1Q86V48 1076 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 NPAS3Q8IXF0 933 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 ZDHHC14Q8IZN3 488 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 RBBP8NLQ8NC74 664 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 FGF13Q92913 245 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 JAKMIP2Q96AA8 810 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 SMOQ99835 787 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 EPS15L1Q9UBC2 864 aa9.4□□□□□ -0.9
NECAP1-212ENST00000638787 MAGED2Q9UNF1 606 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-212ENST00000638787 A0A1W2PRU2 124 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 MICAL2O94851 1124 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 LAMP2P13473 410 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 CD19P15391 556 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 GJA1P17302 382 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 GABRR2P28476 465 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 ARHGAP44Q17R89 818 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 SGO2Q562F6 1265 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 LRSAM1Q6UWE0 723 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 ZMIZ2Q8NF64 920 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.91
NECAP1-212ENST00000638787 GCNAQ96QF7 691 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 KCNK16Q96T55 309 aa9.4□□□□□ -0.91
NECAP1-212ENST00000638787 IL21Q9HBE4 155 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms