RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 INTS8Q75QN2 995 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 SV2AQ7L0J3 742 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 C1orf210Q8IVY1 113 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 FAM186BQ8IYM0 893 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 CELF5Q8N6W0 485 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 B3GALNT2Q8NCR0 500 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ENGASEQ8NFI3 743 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ZFYVE19Q96K21 471 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 MYRFLQ96LU7 910 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 TRPC7Q9HCX4 862 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 SPATA6Q9NWH7 488 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 PTPRDP23468 1912 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ZNF638Q14966 1978 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 IKBKBO14920 756 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 TRIM66O15016 1216 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 TRIM49P0CI25 452 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 TRIM49CP0CI26 452 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 P4HA1P13674 534 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 PSMC2P35998 433 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 NBL1P41271 181 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 MAGEA9P43362 315 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 KPNA1P52294 538 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 ZCWPW2Q504Y3 356 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 C1orf220Q5T0J3 134 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 FRMD5Q7Z6J6 570 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 MON1AQ86VX9 555 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 FAM3CQ92520 227 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 SPATA17Q96L03 361 aa17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 THG1LQ9NWX6 298 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 ZFHX2Q9C0A1 2572 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-259ENST00000638114 SOBPA7XYQ1 873 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 F8VP50 259 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 SMC2O95347 1197 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 HLA-DRAP01903 254 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 CCNE1P24864 410 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 EDRF1Q3B7T1 1238 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 GREB1Q4ZG55 1949 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 TTC8Q8TAM2 541 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 TAF4BQ92750 862 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 ERCC4Q92889 916 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 USP13Q92995 863 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 CLDN23Q96B33 292 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 CEP295NLQ96MC4 621 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 ZNF518BQ9C0D4 1074 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 ELOVL4Q9GZR5 314 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 SDCBP2Q9H190 292 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 MMRN2Q9H8L6 949 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 KIF9Q9HAQ2 790 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 TDP1Q9NUW8 608 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 CCL26Q9Y258 94 aa17.85■□□□□ 0.45
CACNA1A-259ENST00000638114 CACNA1IQ9P0X4 2223 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 ATP8B3O60423 1300 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 PROB1E7EW31 1015 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 CLDN5O00501 218 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 LAMTOR5O43504 91 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 GFRA3O60609 400 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 ASS1P00966 412 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 SOX9P48436 509 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 GCLMP48507 274 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 ZNF658Q5TYW1 1059 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 SPOPLQ6IQ16 392 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 DENND5BQ6ZUT9 1274 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 SMARCE1Q969G3 411 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 EEF2KMTQ96G04 330 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 MSANTD3Q96H12 275 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 TNIP3Q96KP6 325 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 C8orf48Q96LL4 319 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 MED10Q9BTT4 135 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 B3GNT5Q9BYG0 378 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 IMPG2Q9BZV3 1241 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 C8orf33Q9H7E9 229 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 GTSE1Q9NYZ3 720 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 PCDHA5Q9Y5H7 936 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 PATJQ8NI35 1801 aa17.84■□□□□ 0.45
CACNA1A-259ENST00000638114 TRAV19A0A0A6YYK7 116 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 CKMP06732 381 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 PRCPP42785 496 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 RPS9P46781 194 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 CACNA2D1P54289 1103 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 MLLT6P55198 1093 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 USP46P62068 366 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 TNK2Q07912 1038 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 PPP3CAQ08209 521 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 TTC16Q8NEE8 873 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 TIGD1Q96MW7 591 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 GKN1Q9NS71 199 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 EHD2Q9NZN4 543 aa17.83■□□□□ 0.44
CACNA1A-259ENST00000638114 ANAPC1Q9H1A4 1944 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 KIF26AQ9ULI4 1882 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 SPECC1L-ADORA2AF8WAN1 911 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 CETN3O15182 167 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 USP17L7P0C7H9 530 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 SP9P0CG40 484 aa17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 EPB41P11171 864 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-259ENST00000638114 ASPAP45381 313 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms