RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 TUBGCP4Q9UGJ1 667 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 SIGLEC16A6NMB1 481 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 DNALI1O14645 258 aaPredicted RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 AVILO75366 819 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 LSM8O95777 96 aaKnown RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 KDELR1P24390 212 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 RABGGTBP53611 331 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 AP3M2P53677 418 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 VCPP55072 806 aaKnown RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 ZNF200P98182 395 aaPredicted RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 PIGHQ14442 188 aaPredicted RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 MTHFD1LQ6UB35 978 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 C7orf31Q8N865 590 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 CLEC4CQ8WTT0 213 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 ABCF3Q9NUQ8 709 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 GOLGA8RI6L899 631 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 TSPAN1O60635 241 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 NPTXRO95502 500 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 PDGFRBP09619 1106 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 TMEM132DQ14C87 1099 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 ZC3H12AQ5D1E8 599 aaKnown RBP19.83■□□□□ 0.77
CLN5-216ENST00000636780 ZNF618Q5T7W0 954 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 GPRC5AQ8NFJ5 357 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 NDRG1Q92597 394 aaKnown RBP19.83■□□□□ 0.77
CLN5-216ENST00000636780 DPEP3Q9H4B8 488 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 MROH8Q9H579 483 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 GOLGA2P5Q9HBQ8 144 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 DPP3Q9NY33 737 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 TSPAN16Q9UKR8 245 aa19.83■□□□□ 0.77
CLN5-216ENST00000636780 EXOC1LA0A1B0GW35 172 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 RASA4BC9J798 803 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 RASA4O43374 803 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 HIC1Q14526 733 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 PPP1R26Q5T8A7 1209 aaPredicted RBP19.83■□□□□ 0.76
CLN5-216ENST00000636780 DPP9Q86TI2 863 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 KCNN1Q92952 543 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 OSMRQ99650 979 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 ADPGKQ9BRR6 497 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 WDR83Q9BRX9 315 aaKnown RBP19.83■□□□□ 0.76
CLN5-216ENST00000636780 HAUS2Q9NVX0 235 aa19.83■□□□□ 0.76
CLN5-216ENST00000636780 TPX2Q9ULW0 747 aaKnown RBP19.83■□□□□ 0.76
CLN5-216ENST00000636780 CTCFP49711 727 aaPredicted RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 ZNF792Q3KQV3 632 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 PMF1Q6P1K2 205 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 FAM183BPQ6ZVS7 135 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 FASTKD5Q7L8L6 764 aaKnown RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 MPHOSPH6Q99547 160 aaKnown RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 TMEM109Q9BVC6 243 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLN5-216ENST00000636780 PRMT7Q9NVM4 692 aaPredicted RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 USP18Q9UMW8 372 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLN5-216ENST00000636780 SBF1O95248 1867 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 C5orf60A6NFR6 353 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 CDH5P33151 784 aaPredicted RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 MAN1A1P33908 653 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 RPL22P35268 128 aaKnown RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 CETN2P41208 172 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 MYO1EQ12965 1108 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 GRM1Q13255 1194 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 MFSD5Q6N075 450 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 ZCCHC9Q8N567 271 aaKnown RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 RXFP2Q8WXD0 754 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 SERPINB12Q96P63 405 aa19.82■□□□□ 0.76
CLN5-216ENST00000636780 TRIM56Q9BRZ2 755 aaKnown RBP19.82■□□□□ 0.76
CLN5-216ENST00000636780 GABBR2O75899 941 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 PFKMP08237 780 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 SNAPC2Q13487 334 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 SMAD1Q15797 465 aaKnown RBP19.81■□□□□ 0.76
CLN5-216ENST00000636780 GRIK4Q16099 956 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 CA9Q16790 459 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 RNASEH2BQ5TBB1 312 aaKnown RBP19.81■□□□□ 0.76
CLN5-216ENST00000636780 TRIP11Q15643 1979 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 LOC285556D6RIA3 1793 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 TMEM63AO94886 807 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 PDGFRAP16234 1089 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 FOXN2P32314 431 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 GPX6P59796 221 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 BASP1P80723 227 aaKnown RBP19.81■□□□□ 0.76
CLN5-216ENST00000636780 ANKRD20A8PQ5CZ79 823 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 MICALCLQ6ZW33 695 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 TAOK1Q7L7X3 1001 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 IGDCC3Q8IVU1 814 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 ACAP3Q96P50 834 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 NGRNQ9NPE2 291 aaKnown RBP19.81■□□□□ 0.76
CLN5-216ENST00000636780 HEY1Q9Y5J3 304 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 A0A0G2JMZ2 1700 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 LRRC37A2A6NM11 1700 aa19.81■□□□□ 0.76
CLN5-216ENST00000636780 CCL15-CCL14A0A0B4J2E2 113 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 DYNC1LI2O43237 492 aaPredicted RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 HNRNPH1P31943 449 aaKnown RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 CDH6P55285 790 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 SURF1Q15526 300 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 CCL15Q16663 113 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 SYDE1Q6ZW31 735 aaPredicted RBP19.8■□□□□ 0.76
CLN5-216ENST00000636780 CCDC197Q8NCU1 140 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 SLC35B2Q8TB61 432 aa19.8■□□□□ 0.76
CLN5-216ENST00000636780 BRI3BPQ8WY22 251 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms