RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CCR4P51679 360 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 FUT11Q495W5 492 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 TPGS1Q6ZTW0 290 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 TFB1MQ8WVM0 346 aaKnown RBP16.71■□□□□ 0.27
CLN5-208ENST00000636183 UBXN6Q9BZV1 441 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 MARCOQ9UEW3 520 aaPredicted RBP16.71■□□□□ 0.27
CLN5-208ENST00000636183 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 ESYT3A0FGR9 886 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 BACE1P56817 501 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 LY6KQ17RY6 165 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 GRAMD4Q6IC98 578 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 FAM124AQ86V42 546 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 SGF29Q96ES7 293 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 DEPDC7Q96QD5 511 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 PARD6BQ9BYG5 372 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
CLN5-208ENST00000636183 ALKBH4Q9NXW9 302 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 SNX8Q9Y5X2 465 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 KPNA3O00505 521 aaPredicted RBP16.71■□□□□ 0.27
CLN5-208ENST00000636183 ARHGEF9O43307 516 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 PDHBP11177 359 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 TGM3Q08188 693 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 CAPRIN2Q6IMN6 1127 aaKnown RBP16.71■□□□□ 0.27
CLN5-208ENST00000636183 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
CLN5-208ENST00000636183 NCAPD2Q15021 1401 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 CHURC1-FNTBB4DL54 471 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 ATMINO43313 823 aaPredicted RBP16.71■□□□□ 0.26
CLN5-208ENST00000636183 MAN1A2O60476 641 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 MAP3K6O95382 1288 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 POLBP06746 335 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 CYP2C8P10632 490 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 HDAC4P56524 1084 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 SHCBP1LQ9BZQ2 653 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 DSEQ9UL01 958 aa16.71■□□□□ 0.26
CLN5-208ENST00000636183 PDXKO00764 312 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 AKAP10O43572 662 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 TLL1O43897 1013 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 ENO1P06733 434 aaKnown RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 GSTM1P09488 218 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 CAP2P40123 477 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 LAYNQ6UX15 382 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 C16orf59Q7L2K0 433 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 BBS2Q9BXC9 721 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 CHMP2BQ9UQN3 213 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 GNG14A0A1W2PPG7 69 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 CPSF4O95639 269 aaKnown RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 SETD3Q86TU7 594 aaPredicted RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 FLCNQ8NFG4 579 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 RFFLQ8WZ73 363 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 NDE1Q9NXR1 346 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 GALNT8Q9NY28 637 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 OTOAQ7RTW8 1153 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 EXOSC4Q9NPD3 245 aaKnown RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 TRPC4Q9UBN4 977 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 GPN3Q9UHW5 284 aaPredicted RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 CHUKO15111 745 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 SOAT2O75908 522 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 ITPK1Q13572 414 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 B3GALNT2Q8NCR0 500 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 NIF3L1Q9GZT8 377 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 ABCB6Q9NP58 842 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 KANSL3Q9P2N6 904 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 DGKIO75912 1065 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 KDSRQ06136 332 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 RNASE11Q8TAA1 199 aaKnown RBP16.7■□□□□ 0.26
CLN5-208ENST00000636183 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLN5-208ENST00000636183 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
CLN5-208ENST00000636183 MRPL28Q13084 256 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 KCNV2Q8TDN2 545 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 CLPBQ9H078 707 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 OSBPL3Q9H4L5 887 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 CAB39Q9Y376 341 aaPredicted RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 ANXA11P50995 505 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 SUSD6Q92537 303 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 CDYLQ9Y232 598 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 FMO5P49326 533 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 CYGBQ8WWM9 190 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 ZNF669Q96BR6 464 aaPredicted RBP16.69■□□□□ 0.26
CLN5-208ENST00000636183 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 MYOCQ99972 504 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 ARHGAP31Q2M1Z3 1444 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 KCNK10P57789 538 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 AP2B1P63010 937 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 BTNL9Q6UXG8 535 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 MYO1HQ8N1T3 1032 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 MTMR12Q9C0I1 747 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 MSH4O15457 936 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 TBC1D4O60343 1298 aa16.69■□□□□ 0.26
CLN5-208ENST00000636183 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms