RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TRPM8Q7Z2W7 1104 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC49Q8IUZ0 686 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC71Q8N4P6 559 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CNDP1Q96KN2 507 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PUS3Q9BZE2 481 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 HDHD2Q9H0R4 259 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SRP68Q9UHB9 627 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PBRM1Q86U86 1689 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ATP7AQ04656 1500 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 VPS4BO75351 444 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SPAG6O75602 509 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF618Q5T7W0 954 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CES5AQ6NT32 575 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 EFCAB12Q6NXP0 572 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CYP20A1Q6UW02 462 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 MED8Q96G25 268 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF333Q96JL9 665 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CIPCQ9C0C6 399 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CLEC4MQ9H2X3 399 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ING3Q9NXR8 418 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PAK5Q9P286 719 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CRYL1Q9Y2S2 319 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 AAR2Q9Y312 384 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 MROH7-TTC4A0A0A0MT08 1334 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 F5H6K3 240 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PRKAB2O43741 272 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 MTA2O94776 668 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FGRP09769 529 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CYP2C9P11712 490 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KLRC2P26717 231 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ACADLP28330 430 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CCNG1P51959 295 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 BNC1Q01954 994 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KDSRQ06136 332 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 GFPT1Q06210 699 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KLRC3Q07444 240 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 BIKQ13323 160 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 LPIN1Q14693 890 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PFKFB3Q16875 520 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PAN2Q504Q3 1202 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 USP17L6PQ6QN14 398 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KLHL25Q9H0H3 589 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 VPS33BQ9H267 617 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PEG3Q9GZU2 1588 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KANSL1LA0AUZ9 987 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FAM220BPB1ANY3 271 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 HBP1O60381 514 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RPS6KA4O75676 772 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 IGFBP4P22692 258 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RXRGP48443 463 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CASP8Q14790 479 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ATF7IP2Q5U623 682 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 POTEGQ6S5H5 508 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 EPHX4Q8IUS5 362 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ANKMY2Q8IV38 441 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 MAGEC3Q8TD91 643 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PNMA5Q96PV4 448 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KCNS3Q9BQ31 491 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PRRG4Q9BZD6 226 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RACGAP1Q9H0H5 632 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 TAF1DQ9H5J8 278 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PRMT7Q9NVM4 692 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 VTI1BQ9UEU0 232 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF112Q9UJU3 913 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 XYLBO75191 536 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CRTAMO95727 393 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 HLA-DQA2P01906 255 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CENPCQ03188 943 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CYLC2Q14093 348 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GOLGA7BQ2TAP0 167 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 STRIP1Q5VSL9 837 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 IL1RL2Q9HB29 575 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SH3BP4Q9P0V3 963 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 POTEMA6NI47 508 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 POTECB2RU33 542 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 KPNA6O60684 536 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 DPCR1Q3MIW9 517 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 KBTBD12Q3ZCT8 623 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC39Q96DD0 335 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RAD23BP54727 409 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SLFNL1Q499Z3 407 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SLC30A9Q6PML9 568 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 IKBIPQ70UQ0 350 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MARK2Q7KZI7 788 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 KRT74Q7RTS7 529 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SEPT1Q8WYJ6 367 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 FRMD6Q96NE9 622 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MCEEQ96PE7 176 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MARK1Q9P0L2 795 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 STK39Q9UEW8 545 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ZNRF3Q9ULT6 936 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 HEG1Q9ULI3 1381 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 B2RBV5 119 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CYP27B1O15528 508 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GAS2O43903 313 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RAG1P15918 1043 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PAICSP22234 425 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CES1P23141 567 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 WEE1P30291 646 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 DSG3P32926 999 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms