RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ALDH9A1P49189 494 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 NDUFV1P49821 464 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 CLCN2P51788 898 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ATP8B2P98198 1209 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MGAT2Q10469 447 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MALLQ13021 153 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ZNF268Q14587 947 aaPredicted RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PCBP2Q15366 365 aaKnown RBP eCLIP1.43□□□□□ -2.188e-7■■■■■ 29.4
SMARCB1-209ENST00000635578 NPY5RQ15761 445 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MUM1Q2TAK8 710 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 UAP1L1Q3KQV9 507 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 FLYWCH1Q4VC44 716 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DACT2Q5SW24 774 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 RBM20Q5T481 1227 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 UBAP2Q5T6F2 1119 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 VPS53Q5VIR6 699 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 SYDE2Q5VT97 1194 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 FCRL6Q6DN72 434 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PPP4R4Q6NUP7 873 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MIGA2Q7L4E1 593 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 NECAB2Q7Z6G3 386 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DCP1BQ8IZD4 617 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DCBLD1Q8N8Z6 715 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 C1orf162Q8NEQ5 155 aaPredicted RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 OR2I1PQ8NGU4 316 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 C16orf52Q8NHV5 167 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PIGOQ8TEQ8 1089 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 NRG4Q8WWG1 115 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ATRIPQ8WXE1 791 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DPF2Q92785 391 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 CUL5Q93034 780 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 CYFIP2Q96F07 1278 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 TMX3Q96JJ7 454 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 RITA1Q96K30 269 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ZC3H10Q96K80 434 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ORAI2Q96SN7 254 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 C7orf25Q9BPX7 421 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 SLCO5A1Q9H2Y9 848 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MANSC1Q9H8J5 431 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 SLAMF7Q9NQ25 335 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 POT1Q9NUX5 634 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 DLL3Q9NYJ7 618 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 IP6K2Q9UHH9 426 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 NOP58Q9Y2X3 529 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 LUC7L2Q9Y383 392 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PCDHA13Q9Y5I0 950 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 GPR45Q9Y5Y3 372 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PREX2Q70Z35 1606 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PHLDB1Q86UU1 1377 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ABCA9Q8IUA7 1624 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 RAPGEF6Q8TEU7 1601 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 MAGI1Q96QZ7 1491 aaPredicted RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 GCC2Q8IWJ2 1684 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 RSF1Q96T23 1441 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 MAPKBP1O60336 1514 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 IFITM10A6NMD0 228 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 POLRMTO00411 1230 aaKnown RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 FCHO1O14526 889 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 PPM1DO15297 605 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 EXOC3O60645 756 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 NDUFS2O75306 463 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 VPS4BO75351 444 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 RPLP2P05387 115 aaKnown RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 MTHFD1P11586 935 aaKnown RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 AGXTP21549 392 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 HOXD9P28356 352 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 PDE1AP54750 535 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 CTXN1P60606 82 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 ERVK-21P61565 698 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 HOXA4Q00056 320 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 LEXMQ3ZCV2 418 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 CERKLQ49MI3 558 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 BRDTQ58F21 947 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 PPP4R3AQ6IN85 833 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 FBXL22Q6P050 247 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 ANKRD16Q6P6B7 361 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 ZNF549Q6P9A3 640 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 TRIM72Q6ZMU5 477 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 GADL1Q6ZQY3 521 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 ZNF365Q70YC5 407 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 TMPRSS9Q7Z410 1059 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 FOXP4Q8IVH2 680 aaPredicted RBP1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 LRRC71Q8N4P6 559 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 PSD4Q8NDX1 1056 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 TMEM255BQ8WV15 326 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 JADE3Q92613 823 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 HDAC10Q969S8 669 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 FAM136AQ96C01 138 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 COQ8BQ96D53 544 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 GPATCH3Q96I76 525 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 LMLNQ96KR4 655 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 LRGUKQ96M69 825 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 SMOQ99835 787 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 FAM118BQ9BPY3 351 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 AMBRA1Q9C0C7 1298 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 SERHLQ9NQF3 203 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 TDP1Q9NUW8 608 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 JKAMPQ9P055 326 aa1.42□□□□□ -2.18
SMARCB1-209ENST00000635578 TCEAL9Q9UHQ7 104 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms