RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZSWIM1Q9BR11 485 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 LMAN2LQ9H0V9 348 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 PPP2R2CQ9Y2T4 447 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 PRRC2BQ5JSZ5 2229 aaKnown RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 O00370 1275 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 PLEKP08567 350 aaPredicted RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 KLRC2P26717 231 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 PRKCIP41743 596 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 CDR2Q01850 454 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 CNGA2Q16280 664 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 PTPROQ16827 1216 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 GOLGA7BQ2TAP0 167 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 HGSNATQ68CP4 663 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 ARHGAP17Q68EM7 881 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 PALB2Q86YC2 1186 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 MICALL1Q8N3F8 863 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 AGPAT1Q99943 283 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 ARGLU1Q9NWB6 273 aaPredicted RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 ABI2Q9NYB9 513 aaPredicted RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 HESX1Q9UBX0 185 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 TSPAN16Q9UKR8 245 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 IRAK3Q9Y616 596 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 MTCH2Q9Y6C9 303 aa15.3■□□□□ 0.04
LINC00339-208ENST00000634934 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
LINC00339-208ENST00000634934 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 TADA3O75528 432 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ADH1AP07327 375 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 MMEP08473 750 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 CFHP08603 1231 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 TNFAIP3P21580 790 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 RAB33AQ14088 237 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 STILQ15468 1287 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 CCDC85BQ15834 202 aaPredicted RBP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 MEA1Q16626 185 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 LCLAT1Q6UWP7 414 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 FAM35AQ86V20 835 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 PASD1Q8IV76 773 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ATAD1Q8NBU5 361 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 CHP1Q99653 195 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 HNRNPABQ99729 332 aaKnown RBP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF518BQ9C0D4 1074 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 ARHGAP20Q9P2F6 1191 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00339-208ENST00000634934 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
LINC00339-208ENST00000634934 MTMR11A4FU01 709 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 M0QYV0 167 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 MICAL2O94851 1124 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 CHRNB2P17787 502 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 BDNFP23560 247 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
LINC00339-208ENST00000634934 CBX1P83916 185 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 ADCY1Q08828 1119 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 ELF2Q15723 593 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 DENND1BQ6P3S1 775 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 PAQR9Q6ZVX9 377 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
LINC00339-208ENST00000634934 VPS36Q86VN1 386 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 UBA3Q8TBC4 463 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 PPM1EQ8WY54 764 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
LINC00339-208ENST00000634934 DEF6Q9H4E7 631 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 AFF4Q9UHB7 1163 aaKnown RBP15.28■□□□□ 0.04
LINC00339-208ENST00000634934 SLC27A5Q9Y2P5 690 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 UNC80Q8N2C7 3258 aa15.28■□□□□ 0.04
LINC00339-208ENST00000634934 FAM170AA1A519 330 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 AP1G2O75843 785 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 FAM200BP0CF97 657 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 CYP2F1P24903 491 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 CDK17Q00537 523 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 FMO1Q01740 532 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 TPGS2Q68CL5 300 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.04
LINC00339-208ENST00000634934 CCDC42Q96M95 316 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 NHEJ1Q9H9Q4 299 aaPredicted RBP15.27■□□□□ 0.04
LINC00339-208ENST00000634934 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 CEP83Q9Y592 693 aa15.27■□□□□ 0.04
LINC00339-208ENST00000634934 MYO7AQ13402 2215 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 PER2O15055 1255 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms