RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 GRK4P32298 578 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SGO1Q5FBB7 561 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 GUF1Q8N442 669 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 DDX47Q9H0S4 455 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CNOT7Q9UIV1 285 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ACTN3Q08043 901 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 HLFQ16534 295 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 AVENQ9NQS1 362 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 E9PBE3 544 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 PIK3R1P27986 724 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 GPSM2P81274 684 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CENPCQ03188 943 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 DYNLL2Q96FJ2 89 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ITGB1BP2Q9UKP3 347 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 VWA5AO00534 786 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CHN1P15882 459 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 DHX40Q8IX18 779 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 NSL1Q96IY1 281 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ODC1P11926 461 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SLITRK1Q96PX8 696 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 MKL2Q9ULH7 1088 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ATP9BO43861 1147 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ANXA9O76027 345 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 RCN1Q15293 331 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 RNF146Q9NTX7 359 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SH3BP4Q9P0V3 963 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 KLHL20Q9Y2M5 609 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 NDUFB5O43674 189 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 TGM2P21980 687 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 COPG2Q9UBF2 871 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 MARCOQ9UEW3 520 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 H3BMM5 538 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CYP21A2P08686 494 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 NOS3P29474 1203 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 RPS6P62753 249 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 CDH24Q86UP0 819 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 VPS33AQ96AX1 596 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 HMG20AQ9NP66 347 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
SYNGAP1-208ENST00000629380 XPO1O14980 1071 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ASNA1O43681 348 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 VPS26AO75436 327 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 CHRNB3Q05901 458 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 IER5Q5VY09 327 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 CHSY1Q86X52 802 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 NEU2Q9Y3R4 380 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 RIN3Q8TB24 985 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ADI1Q9BV57 179 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 VHLP40337 213 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 DDR2Q16832 855 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 NAPEPLDQ6IQ20 393 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 PCDHGA4Q9Y5G9 962 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 HDHD2Q9H0R4 259 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 CCNG1P51959 295 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ARMC4Q5T2S8 1044 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 C11orf74Q86VG3 221 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ROPN1BQ9BZX4 212 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 ROPN1Q9HAT0 212 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 GSTM1P09488 218 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 TGFB2P61812 414 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 MTA1Q13330 715 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 SLC25A24Q6NUK1 477 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 MAGED4Q96JG8 741 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 RP1P56715 2156 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 FAM220BPB1ANY3 271 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 PSMD12O00232 456 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 MUTP22033 750 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 GTF2A2P52657 109 aa13.66□□□□□ -0.22
SYNGAP1-208ENST00000629380 NCOA4Q13772 614 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms