RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 FRMD5Q7Z6J6 570 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 C1orf210Q8IVY1 113 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
CHD2-217ENST00000629136 MAB21L3Q8N8X9 362 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 BPIFB1Q8TDL5 484 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 CLDN23Q96B33 292 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 SNX25Q9H3E2 840 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 UXTQ9UBK9 157 aaPredicted RBP11.5□□□□□ -0.57
CHD2-217ENST00000629136 ZMYM5Q9UJ78 669 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 FRMD4BQ9Y2L6 1034 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
CHD2-217ENST00000629136 A8MXQ7 604 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 DPYSL4O14531 572 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 IKBKBO14920 756 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 TRIM49P0CI25 452 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 TRIM49CP0CI26 452 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 PTPN1P18031 435 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 DDX6P26196 483 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHD2-217ENST00000629136 AVPR1AP37288 418 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 MAGEA9P43362 315 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 RPS9P46781 194 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 SOX9P48436 509 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 VAMP7P51809 220 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 USP46P62068 366 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 SPOPLQ6IQ16 392 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 FAM186BQ8IYM0 893 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 CELF5Q8N6W0 485 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 B3GALNT2Q8NCR0 500 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 SPATA20Q8TB22 786 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 CSGALNACT1Q8TDX6 532 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 MRPS31Q92665 395 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 SPATA17Q96L03 361 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 GTSE1Q9NYZ3 720 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 HMGXB4Q9UGU5 601 aa11.49□□□□□ -0.57
CHD2-217ENST00000629136 NDRG2Q9UN36 371 aaKnown RBP11.49□□□□□ -0.57
CHD2-217ENST00000629136 C2orf78A6NCI8 922 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 PRR23AA6NEV1 266 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 SOBPA7XYQ1 873 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 F8VP50 259 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CLDN5O00501 218 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 MAN2B1O00754 1011 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 TRIM66O15016 1216 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 GFRA3O60609 400 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CLSTN1O94985 981 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CCNE1P24864 410 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 GRIK1P39086 918 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 PIK3CAP42336 1068 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 ASPAP45381 313 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 MLLT6P55198 1093 aaPredicted RBP11.48□□□□□ -0.57
CHD2-217ENST00000629136 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
CHD2-217ENST00000629136 TNK2Q07912 1038 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 PPP3CAQ08209 521 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 USP4Q13107 963 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 TXNDC11Q6PKC3 985 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 DENND5BQ6ZUT9 1274 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
CHD2-217ENST00000629136 ASCL5Q7RTU5 278 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 MON1AQ86VX9 555 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 TTC8Q8TAM2 541 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 FAM3CQ92520 227 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CHFRQ96EP1 664 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CCDC34Q96HJ3 373 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 C8orf48Q96LL4 319 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 CEP295NLQ96MC4 621 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 SLC22A12Q96S37 553 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 NELL2Q99435 816 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 TTLL2Q9BWV7 592 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 B3GNT5Q9BYG0 378 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 ELOVL4Q9GZR5 314 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 KIF9Q9HAQ2 790 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 TDP1Q9NUW8 608 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 RMND1Q9NWS8 449 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 MRPS17Q9Y2R5 130 aaKnown RBP11.48□□□□□ -0.57
CHD2-217ENST00000629136 F5P12259 2224 aa11.48□□□□□ -0.57
CHD2-217ENST00000629136 SPECC1L-ADORA2AF8WAN1 911 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 NCAM2O15394 837 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 SP9P0CG40 484 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 ANXA13P27216 316 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 CTHP32929 405 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
CHD2-217ENST00000629136 PRCPP42785 496 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 GCLMP48507 274 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
CHD2-217ENST00000629136 ENPEPQ07075 957 aa11.47□□□□□ -0.57
CHD2-217ENST00000629136 ORC1Q13415 861 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms