RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PASD1Q8IV76 773 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 FUKQ8N0W3 1084 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF461Q8TAF7 563 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 EPS8L1Q8TE68 723 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 C2orf15Q8WU43 125 aaKnown RBP9.03□□□□□ -0.96
SGMS1-211ENST00000626236 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF606Q8WXB4 792 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 ZSWIM1Q9BR11 485 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 RHOBTB2Q9BYZ6 727 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF518BQ9C0D4 1074 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 HAUS4Q9H6D7 363 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 SEPT11Q9NVA2 429 aaKnown RBP9.03□□□□□ -0.96
SGMS1-211ENST00000626236 AFF4Q9UHB7 1163 aaKnown RBP9.03□□□□□ -0.96
SGMS1-211ENST00000626236 NOCTQ9UK39 431 aaKnown RBP9.03□□□□□ -0.96
SGMS1-211ENST00000626236 TSPAN16Q9UKR8 245 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.03□□□□□ -0.96
SGMS1-211ENST00000626236 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
SGMS1-211ENST00000626236 REV3LO60673 3130 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 FAM170AA1A519 330 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 TGM5O43548 720 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 AP1G2O75843 785 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 MICAL2O94851 1124 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 ABLIM3O94929 683 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 VNN2O95498 520 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 GLUD1P00367 558 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 MMEP08473 750 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CFHP08603 1231 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 ATF2P15336 505 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 IGFBP4P22692 258 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 BDNFP23560 247 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 HNRNPH3P31942 346 aaKnown RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 PRKCIP41743 596 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 NRIP1P48552 1158 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CLCN4P51793 760 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 GSDMDP57764 484 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CDR2Q01850 454 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 DUSP4Q13115 394 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CNGA2Q16280 664 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CFAP221Q4G0U5 840 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 TPGS2Q68CL5 300 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 HGSNATQ68CP4 663 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 LLGL2Q6P1M3 1020 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 WDR59Q6PJI9 974 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 LCLAT1Q6UWP7 414 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 PAQR9Q6ZVX9 377 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 Q7L0L9 218 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 ZNF677Q86XU0 584 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 TTC9BQ8N6N2 239 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 ATAD1Q8NBU5 361 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 UBA3Q8TBC4 463 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 SMARCD1Q96GM5 515 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 FUBP3Q96I24 572 aaKnown RBP eCLIP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 PANX2Q96RD6 677 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 SEPT5Q99719 369 aaPredicted RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 HNRNPABQ99729 332 aaKnown RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 AGPAT1Q99943 283 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 NSUN3Q9H649 340 aaKnown RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 TLE6Q9H808 572 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 CYP4F11Q9HBI6 524 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 KRT82Q9NSB4 513 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 HESX1Q9UBX0 185 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
SGMS1-211ENST00000626236 BZW2Q9Y6E2 419 aaKnown RBP9.02□□□□□ -0.97
SGMS1-211ENST00000626236 GREB1Q4ZG55 1949 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 PRRG1O14668 218 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 SOAT2O75908 522 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 BEST1O76090 585 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 SEC24AO95486 1093 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
SGMS1-211ENST00000626236 HAPLN1P10915 354 aaPredicted RBP9.01□□□□□ -0.97
SGMS1-211ENST00000626236 EPCAMP16422 314 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 NPR3P17342 541 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 CHRNB2P17787 502 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 TNFAIP3P21580 790 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 ANXA13P27216 316 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 ELF1P32519 619 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
SGMS1-211ENST00000626236 GRIK1P39086 918 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 CACNA2D1P54289 1103 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 BCAT1P54687 386 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 MAP3K7CLP57077 242 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 SLC8A3P57103 927 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 FMO1Q01740 532 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 CCDC173Q0VFZ6 552 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 BST2Q10589 180 aaKnown RBP9.01□□□□□ -0.97
SGMS1-211ENST00000626236 ADGRE1Q14246 886 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 MEA1Q16626 185 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 DUSP6Q16828 381 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 TCEAL5Q5H9L2 206 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 LIN9Q5TKA1 542 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 DENND1BQ6P3S1 775 aa9.01□□□□□ -0.97
SGMS1-211ENST00000626236 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms