RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 SPATA17Q96L03 361 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 GOLPH3LQ9H4A5 285 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 KIF9Q9HAQ2 790 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 TDP1Q9NUW8 608 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 GTSE1Q9NYZ3 720 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 EHD2Q9NZN4 543 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 R4GN57 208 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 TRIOO75962 3097 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 GOLGA6L4A6NEF3 574 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 SPECC1L-ADORA2AF8WAN1 911 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 TRIM66O15016 1216 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 MAPK13O15264 365 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 LMNAP02545 664 aaKnown RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 RPL13P26373 211 aaKnown RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 DLG4P78352 724 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 MTAPQ13126 283 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF268Q14587 947 aaPredicted RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 NFIL3Q16649 462 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF699Q32M78 642 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF667Q5HYK9 610 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 DENND5BQ6ZUT9 1274 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 C8orf48Q96LL4 319 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 FAM83CQ9BQN1 747 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 TRPC7Q9HCX4 862 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 GKN1Q9NS71 199 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 MAPK8IP1Q9UQF2 711 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 CCL26Q9Y258 94 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 NME7Q9Y5B8 376 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 MTCL1Q9Y4B5 1905 aaKnown RBP11.56□□□□□ -0.56
SSBP4-215ENST00000625926 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
SSBP4-215ENST00000625926 CFAP47Q6ZTR5 3102 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 TRAV19A0A0A6YYK7 116 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 TADA3O75528 432 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 VNN1O95497 513 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 CHRNB1P11230 501 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 P4HA1P13674 534 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 NR2F2P24468 414 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 CTHP32929 405 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 SOX9P48436 509 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 PDE6CP51160 858 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 VAMP7P51809 220 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 CDH8P55286 799 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 TNK2Q07912 1038 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 LRRC32Q14392 662 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 PPP2R5DQ14738 602 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 ITPRIPL2Q3MIP1 535 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 ZACNQ401N2 412 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
SSBP4-215ENST00000625926 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 ADSSL1Q8N142 457 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 TAF4BQ92750 862 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 TNIP3Q96KP6 325 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 ELOVL4Q9GZR5 314 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 DPEP3Q9H4B8 488 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 SMYD3Q9H7B4 428 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 RMND1Q9NWS8 449 aa11.55□□□□□ -0.56
SSBP4-215ENST00000625926 CITO14578 2027 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 F8VP50 259 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 AKAP3O75969 853 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 CKMP06732 381 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 KRT13P13646 458 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 HDCP19113 662 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 PSMC2P35998 433 aaKnown RBP11.54□□□□□ -0.56
SSBP4-215ENST00000625926 PPP3CCP48454 512 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 USP46P62068 366 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 NOP14P78316 857 aaKnown RBP11.54□□□□□ -0.56
SSBP4-215ENST00000625926 AMPD2Q01433 879 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 ADAM9Q13443 819 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 RUNX3Q13761 415 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 PDGFRLQ15198 375 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 TXNDC11Q6PKC3 985 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 TTLL2Q9BWV7 592 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 B3GNT5Q9BYG0 378 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF518BQ9C0D4 1074 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
SSBP4-215ENST00000625926 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 PCDHGA2Q9Y5H1 932 aa11.54□□□□□ -0.56
SSBP4-215ENST00000625926 MYO10Q9HD67 2058 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 ASS1P00966 412 aaKnown RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 PFKLP17858 780 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 RAP1GAPP47736 663 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 CXCL12P48061 93 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 CCR3P51677 355 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms