RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 NDRG4Q9ULP0 352 aaKnown RBP4.89□□□□□ -1.63
CDR1-202ENST00000625883 SPATA31A3Q5VYP0 1347 aa4.89□□□□□ -1.63
CDR1-202ENST00000625883 LGALS16A8MUM7 142 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 NPC1O15118 1278 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 SKAP2O75563 359 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 CSF1RP07333 972 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PPIFP30405 207 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 VAV2P52735 878 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 ITGA8P53708 1063 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 HLXQ14774 488 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 CDSNQ15517 529 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 PFKFB4Q16877 469 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PTCHD3Q3KNS1 767 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 TMEM95Q3KNT9 176 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 ZACNQ401N2 412 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 RBM20Q5T481 1227 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 CACHD1Q5VU97 1274 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 MICALCLQ6ZW33 695 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PRRT2Q7Z6L0 340 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 CACNA2D3Q8IZS8 1091 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 EXTL1Q92935 676 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 BOD1Q96IK1 185 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 SNX27Q96L92 541 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 RMDN3Q96TC7 470 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 ALOXE3Q9BYJ1 711 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDR1-202ENST00000625883 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 AGO4Q9HCK5 861 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 NECTIN3Q9NQS3 549 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 SMPD4Q9NXE4 827 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 LUZP4Q9P127 313 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 SSX2IPQ9Y2D8 614 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 TESMINQ9Y4I5 508 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PCDHGB3Q9Y5G1 929 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 A0A0B4J269 797 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 MYADML2A6NDP7 307 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 AQP12BA6NM10 295 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PIAS2O75928 621 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 NDUFA10O95299 355 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 VEGFAP15692 232 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 EGR1P18146 543 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 GATA3P23771 443 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 GRK6P43250 576 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 FPGSQ05932 587 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 RESTQ13127 1097 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 TUBB3Q13509 450 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PREPLQ4J6C6 727 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 ARHGAP40Q5TG30 622 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 RAP1GAP2Q684P5 730 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 CPEB3Q8NE35 698 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 SNX19Q92543 992 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 FUBP1Q96AE4 644 aaKnown RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 OSBPL9Q96SU4 736 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 PCDHAC1Q9H158 963 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 ZNF703Q9H7S9 590 aaPredicted RBP4.88□□□□□ -1.63
CDR1-202ENST00000625883 GALNT9Q9HCQ5 603 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDR1-202ENST00000625883 NOX1Q9Y5S8 564 aa4.88□□□□□ -1.63
CDR1-202ENST00000625883 hCG_1642624A0A1W2PR95 340 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 AQP7P3A6NL99 342 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 F5H697 171 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SYT5O00445 386 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 CDKL5O76039 1030 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 RASAL1O95294 804 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 MST1P26927 711 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 CD6P30203 668 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 ATICP31939 592 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SATB1Q01826 763 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 EFEMP1Q12805 493 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SPARCL1Q14515 664 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 ARHGAP15Q53QZ3 475 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SPDYAQ5MJ70 313 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 MANEALQ5VSG8 457 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SP5Q6BEB4 398 aaPredicted RBP4.87□□□□□ -1.63
CDR1-202ENST00000625883 RGS7BPQ6MZT1 257 aaPredicted RBP4.87□□□□□ -1.63
CDR1-202ENST00000625883 USP17L6PQ6QN14 398 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 LDHAL6AQ6ZMR3 332 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 C1orf210Q8IVY1 113 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 CCDC28AQ8IWP9 274 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 ZNF276Q8N554 614 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 ATG16L2Q8NAA4 619 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 CCDC150Q8NCX0 1101 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 DNAJB14Q8TBM8 379 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SMCR8Q8TEV9 937 aaPredicted RBP4.87□□□□□ -1.63
CDR1-202ENST00000625883 STYXQ8WUJ0 223 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 PPP2R3CQ969Q6 453 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 CDK5RAP1Q96SZ6 601 aaKnown RBP4.87□□□□□ -1.63
CDR1-202ENST00000625883 TRIM5Q9C035 493 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 GRHPRQ9UBQ7 328 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 SERTAD3Q9UJW9 196 aa4.87□□□□□ -1.63
CDR1-202ENST00000625883 ZMYND8Q9ULU4 1186 aaPredicted RBP4.87□□□□□ -1.63
CDR1-202ENST00000625883 ACKR2O00590 384 aa4.86□□□□□ -1.63
CDR1-202ENST00000625883 PIP5K1BO14986 540 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms