RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 CBWD2Q8IUF1 395 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 NPAS4Q8IUM7 802 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 DHX40Q8IX18 779 aaKnown RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 ATP11CQ8NB49 1132 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 CPA5Q8WXQ8 436 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 C18orf25Q96B23 403 aaPredicted RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 ZMYND8Q9ULU4 1186 aaPredicted RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 ADH1CP00326 375 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 KRT14P02533 472 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 ATP5C1P36542 298 aaKnown RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 SESN3P58005 492 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 TRIP13Q15645 432 aaPredicted RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 AMHR2Q16671 573 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 CCDC60Q8IWA6 550 aaPredicted RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 EXT2Q93063 718 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 TMA16Q96EY4 203 aaKnown RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 YIPF2Q9BWQ6 316 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 VCX3BQ9H321 246 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 PCDHA2Q9Y5H9 948 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 ARVCFO00192 962 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 MLH1P40692 756 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 FBXW4P57775 412 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 CENPCQ03188 943 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 TUSC3Q13454 348 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 SLC18A3Q16572 532 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 TTPALQ9BTX7 342 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 BRD8Q9H0E9 1235 aa12.24□□□□□ -0.45
CHD2-205ENST00000625662 AAR2Q9Y312 384 aaKnown RBP12.24□□□□□ -0.45
CHD2-205ENST00000625662 PCDH8O95206 1070 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ATP1A1P05023 1023 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 CYP2C18P33260 490 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 PSMC6P62333 389 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 POLR2LP62875 67 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 GFPT1Q06210 699 aaPredicted RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ZNF697Q5TEC3 545 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 MGARPQ8TDB4 240 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 LRGUKQ96M69 825 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 AFF4Q9UHB7 1163 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 LTN1O94822 1766 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 PIK3R2O00459 728 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GSTA4O15217 222 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 KCNN4O15554 427 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 PRPF4O43172 522 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHD2-205ENST00000625662 DYRK3O43781 588 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 H2AFYO75367 372 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 FDFT1P37268 417 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 MAPK8P45983 427 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 COPS2P61201 443 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 PDAP1Q13442 181 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 RGL4Q8IZJ4 473 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GIPC2Q8TF65 315 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 FOXP3Q9BZS1 431 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 FAM105AQ9NUU6 356 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GIMAP4Q9NUV9 329 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 KIF1CO43896 1103 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 PFDN1O60925 122 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 USP17L7P0C7H9 530 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 TMEM253P0C7T8 217 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 DHX34Q14147 1143 aaKnown RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 HIST2H2ACQ16777 129 aaPredicted RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 FAM46CQ5VWP2 391 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 HIST2H2AA3Q6FI13 130 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ADCK2Q7Z695 626 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 SPPL2BQ8TCT7 592 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 EPB41L5Q9HCM4 733 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ABCC13Q9NSE7 274 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 TBC1D14Q9P2M4 693 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 DNPEPQ9ULA0 475 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 LACTBL1A8MY62 500 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 PDE2AO00408 941 aaPredicted RBP12.23□□□□□ -0.45
CHD2-205ENST00000625662 ITGALP20701 1170 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GRM5P41594 1212 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 ACLYP53396 1101 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GTF3C4Q9UKN8 822 aa12.23□□□□□ -0.45
CHD2-205ENST00000625662 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
CHD2-205ENST00000625662 COPEO14579 308 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 EOMESO95936 686 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 PTENP60484 403 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.22□□□□□ -0.458e-12■■■□□ 15.4
CHD2-205ENST00000625662 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
CHD2-205ENST00000625662 ZNF263O14978 683 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms