RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 MAP3K13O43283 966 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 HUS1O60921 280 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 POLR2BP30876 1174 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 PNPLA4P41247 253 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 ZNF131P52739 623 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 TFAMQ00059 246 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 GTF2BQ00403 316 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 MYL7Q01449 175 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 INTS6LQ5JSJ4 861 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 SLFN12LQ6IEE8 588 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 SPATA2LQ8IUW3 424 aaPredicted RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 POMGNT1Q8WZA1 660 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 TRMT2BQ96GJ1 504 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 ZSCAN31Q96LW9 406 aaPredicted RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 NUSAP1Q9BXS6 441 aaKnown RBP15.77■□□□□ 0.12
PNKP-218ENST00000625299 SLC32A1Q9H598 525 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 ABCB6Q9NP58 842 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
PNKP-218ENST00000625299 MMP17Q9ULZ9 603 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 LHX6Q9UPM6 363 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 AGAP1Q9UPQ3 857 aa15.77■□□□□ 0.12
PNKP-218ENST00000625299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 SPAARA0A1B0GVQ0 90 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 HCRTO43612 131 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 ALDH1A2O94788 518 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 ITGB3P05106 788 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 HDCP19113 662 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 OPRD1P41143 372 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 UBA7P41226 1012 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 LMAN2Q12907 356 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 CRY1Q16526 586 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 TMEFF1Q8IYR6 380 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 MYRFLQ96LU7 910 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 FIZ1Q96SL8 496 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 ACBD6Q9BR61 282 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 GCNT4Q9P109 453 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 KLK13Q9UKR3 277 aa15.76■□□□□ 0.11
PNKP-218ENST00000625299 TNRC6BQ9UPQ9 1833 aaKnown RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 GON4LQ3T8J9 2241 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 ADAMTS9Q9P2N4 1935 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 SCAMP3O14828 347 aaKnown RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 IL18RAPO95256 599 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 PLCG1P19174 1290 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 ABCD1P33897 745 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 TIE1P35590 1138 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 PI4KAP42356 2102 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 RING1Q06587 406 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 CRELD2Q6UXH1 353 aaPredicted RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 TMEM92Q6UXU6 159 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 OSTM1Q86WC4 334 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 ALLCQ8N6M5 410 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 FRMD1Q8N878 549 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 TXNDC5Q8NBS9 432 aaKnown RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 NOC3LQ8WTT2 800 aaKnown RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 FAM84AQ96KN4 292 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 FAM213AQ9BRX8 229 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 EVLQ9UI08 416 aaPredicted RBP15.75■□□□□ 0.11
PNKP-218ENST00000625299 ARHGAP26Q9UNA1 814 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 NEUROG3Q9Y4Z2 214 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 SNX9Q9Y5X1 595 aa15.75■□□□□ 0.11
PNKP-218ENST00000625299 FASNP49327 2511 aaKnown RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 CACNA1EQ15878 2313 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 SEC24BO95487 1268 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 KLF8O95600 359 aaPredicted RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 CFIP05156 583 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 KRT19P08727 400 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 HNRNPLP14866 589 aaKnown RBP eCLIP15.74■□□□□ 0.11
PNKP-218ENST00000625299 ENGP17813 658 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 PTGER3P43115 390 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 WNT7BP56706 349 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 SIM1P81133 766 aaPredicted RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 SFTPA1Q8IWL2 248 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 ADGRF2Q8IZF7 708 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 TMEM86AQ8N2M4 240 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 PGBD3Q8N328 593 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 WHAMMQ8TF30 809 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 RAD54LQ92698 747 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 SAAL1Q96ER3 474 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 AK8Q96MA6 479 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 PKMYT1Q99640 499 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 GTPBP2Q9BX10 602 aaKnown RBP15.74■□□□□ 0.11
PNKP-218ENST00000625299 FSCN3Q9NQT6 498 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 TMEM74BQ9NUR3 256 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 STYXL1Q9Y6J8 313 aa15.74■□□□□ 0.11
PNKP-218ENST00000625299 MYMKA6NI61 221 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 LEFTY2O00292 366 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 TNFRSF10BO14763 440 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 CYP17A1P05093 508 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 P2RY2P41231 377 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 SLC6A11P48066 632 aa15.73■□□□□ 0.11
PNKP-218ENST00000625299 PDE6CP51160 858 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms