RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 PGAP2Q9UHJ9 254 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 ZBTB21Q9ULJ3 1066 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 HDAC5Q9UQL6 1122 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PCDHA13Q9Y5I0 950 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 USP16Q9Y5T5 823 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 CEMIPQ8WUJ3 1361 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 VCANP13611 3396 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 UBN2Q6ZU65 1347 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 DOCK3Q8IZD9 2030 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 E2F8A0AVK6 867 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 RECQL4O94761 1208 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 CELF2O95319 508 aaKnown RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 POMCP01189 267 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 SBK3P0C264 359 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 NPR1P16066 1061 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 NCLP19338 710 aaKnown RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 MAKP20794 623 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 MCM7P33993 719 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 IL6STP40189 918 aaPredicted RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 EPHB1P54762 984 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 ZNF280AP59817 542 aaPredicted RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 IGBP1P78318 339 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 DPTQ07507 201 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 ACAP2Q15057 778 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 PLEKHG6Q3KR16 790 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 ATAT1Q5SQI0 421 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 ZNF529Q6P280 563 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 ZNF790Q6PG37 636 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 USP45Q70EL2 814 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 MIGA2Q7L4E1 593 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 FAM90A1Q86YD7 464 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 RHOT1Q8IXI2 618 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 OR56A1Q8NGH5 318 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 CPT1CQ8TCG5 803 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 CCHCR1Q8TD31 782 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 HAS1Q92839 578 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 KAT5Q92993 513 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 AIFM3Q96NN9 605 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 UHRF1Q96T88 793 aaPredicted RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 PSMD1Q99460 953 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 PRRX2Q99811 253 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 GTPBP4Q9BZE4 634 aaKnown RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 C11orf54Q9H0W9 315 aaPredicted RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 TDP1Q9NUW8 608 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 JKAMPQ9P055 326 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 HSFX1Q9UBD0 423 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 PNMA8BQ9ULN7 279 aaPredicted RBP3.95□□□□□ -1.78
CDKL5-208ENST00000624953 FPGT-TNNI3KV9GXZ4 949 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 CUL9Q8IWT3 2517 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 AK9Q5TCS8 1911 aa3.95□□□□□ -1.78
CDKL5-208ENST00000624953 NPC1L1Q9UHC9 1359 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 YDJCA8MPS7 323 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 SLC16A6O15403 523 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 NCR1O76036 304 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 SCAF4O95104 1147 aaKnown RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 ZFPL1O95159 310 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 FTH1P19P0C7X4 201 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 EGR2P11161 476 aaPredicted RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 PDCP20941 246 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 MALP21145 153 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 HK3P52790 923 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 PER3P56645 1201 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 CXCL9Q07325 125 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 NFE2Q16621 373 aaPredicted RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 USP50Q70EL3 339 aaPredicted RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 ZNF365Q70YC5 407 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 MED25Q71SY5 747 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 TTC7BQ86TV6 843 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 ZBTB46Q86UZ6 589 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 TMEM132CQ8N3T6 1108 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 HPS3Q969F9 1004 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 NACC2Q96BF6 587 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 BOD1Q96IK1 185 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 SMAD5Q99717 465 aaKnown RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 CSRNP2Q9H175 543 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 PANK3Q9H999 370 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 RNF186Q9NXI6 227 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 TRPM5Q9NZQ8 1165 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 EIF2B4Q9UI10 523 aaKnown RBP3.94□□□□□ -1.78
CDKL5-208ENST00000624953 KCNE5Q9UJ90 142 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 HS3ST3A1Q9Y663 406 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 ARAP2Q8WZ64 1704 aa3.94□□□□□ -1.78
CDKL5-208ENST00000624953 PTPRFP10586 1907 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 PIPSLA2A3N6 862 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 F2RL2O00254 374 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 GRM6O15303 877 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 CA12O43570 354 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 LPXNO60711 386 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 HAUS5O94927 633 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 SNUPNO95149 360 aaKnown RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 RAP2AP10114 183 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 CKBP12277 381 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 ALAS1P13196 640 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 LAG3P18627 525 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 LPOP22079 712 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-208ENST00000624953 FGFR4P22455 802 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 ANAPC15P60006 121 aa3.93□□□□□ -1.78
CDKL5-208ENST00000624953 NOMO3P69849 1222 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms