RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 NDC80O14777 642 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 CDH16O75309 829 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 SGPL1O95470 568 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 ANP32DO95626 131 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 CCNG1P51959 295 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 PTP4A2Q12974 167 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 ITGA7Q13683 1181 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 NUGGCQ68CJ6 796 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 SV2AQ7L0J3 742 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 CCDC25Q86WR0 208 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 OR5B17Q8NGF7 314 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 ATL2Q8NHH9 583 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 FNBP1Q96RU3 617 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 UBN1Q9NPG3 1134 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
PCF11-207ENST00000624931 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
PCF11-207ENST00000624931 TXLNGQ9NUQ3 528 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 ASIC3Q9UHC3 531 aa18.56■□□□□ 0.56
PCF11-207ENST00000624931 LIN7AO14910 233 aaPredicted RBP18.55■□□□□ 0.56
PCF11-207ENST00000624931 ABHD2P08910 425 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 CXCL8P10145 99 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 CCNB1P14635 433 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 ATF2P15336 505 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 TNNI1P19237 187 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
PCF11-207ENST00000624931 GTF2H1P32780 548 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 STX2P32856 288 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 SLC18A1P54219 525 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 MRPS6P82932 125 aaKnown RBP18.55■□□□□ 0.56
PCF11-207ENST00000624931 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
PCF11-207ENST00000624931 KRT39Q6A163 491 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 ASRGL1Q7L266 308 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 NOP9Q86U38 636 aaKnown RBP18.55■□□□□ 0.56
PCF11-207ENST00000624931 SERINC5Q86VE9 423 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 FBF1Q8TES7 1133 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 KAT5Q92993 513 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 CGRRF1Q99675 332 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 PPCSQ9HAB8 311 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 KCNK9Q9NPC2 374 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 FGFR1OP2Q9NVK5 253 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
PCF11-207ENST00000624931 NPTXRO95502 500 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 MCF2P10911 925 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 BRAFP15056 766 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 IL9RQ01113 521 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 FMO1Q01740 532 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 LONRF1Q17RB8 773 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 TAF2Q6P1X5 1199 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 C15orf39Q6ZRI6 1047 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 SESTD1Q86VW0 696 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 UHMK1Q8TAS1 419 aaKnown RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 TBC1D31Q96DN5 1066 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 PI4K2AQ9BTU6 479 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 EIF2AQ9BY44 585 aaKnown RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 AAASQ9NRG9 546 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 ANAPC5Q9UJX4 755 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 COQ4Q9Y3A0 265 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 THAP12O43422 761 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 LUC7L3O95232 432 aaKnown RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 STAG3L1P0CL83 205 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 EIF4BP23588 611 aaKnown RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 CLDN10P78369 228 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 PARP6Q2NL67 630 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 SPDYAQ5MJ70 313 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 CCDC89Q8N998 374 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 NSMCE1Q8WV22 266 aa18.54■□□□□ 0.56
PCF11-207ENST00000624931 DHX38Q92620 1227 aaKnown RBP18.54■□□□□ 0.56
PCF11-207ENST00000624931 E7ENQ6 273 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 VNN1O95497 513 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 C4BPAP04003 597 aaKnown RBP18.53■□□□□ 0.56
PCF11-207ENST00000624931 CYP11B1P15538 503 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 MSH2P43246 934 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 CRYBB1P53674 252 aaPredicted RBP18.53■□□□□ 0.56
PCF11-207ENST00000624931 PPP1R2P3Q6NXS1 205 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 ZNF677Q86XU0 584 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 DNAJC5GQ8N7S2 189 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 CFAP61Q8NHU2 1237 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 AGAP11Q8TF27 550 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 STAMBPL1Q96FJ0 436 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
PCF11-207ENST00000624931 TCRBV7S2A1N4TA0A589 114 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 ZC3H11AO75152 810 aaKnown RBP eCLIP18.52■□□□□ 0.568e-19■■■□□ 16.8
PCF11-207ENST00000624931 ACSL3O95573 720 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 HLA-DRAP01903 254 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 CHRM1P11229 460 aaPredicted RBP18.52■□□□□ 0.56
PCF11-207ENST00000624931 IVDP26440 423 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 KCNJ1P48048 391 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 CDC42EP1Q00587 391 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 MYO1EQ12965 1108 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 SETDB1Q15047 1291 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 ZACNQ401N2 412 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 CCDC38Q502W7 563 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 NME8Q8N427 588 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 NT5C1BQ96P26 610 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 DEFB118Q96PH6 123 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 TGS1Q96RS0 853 aaKnown RBP18.52■□□□□ 0.56
PCF11-207ENST00000624931 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms