RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 TRPC7Q9HCX4 862 aa16.63■□□□□ 0.25
ATRX-217ENST00000624668 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
ATRX-217ENST00000624668 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
ATRX-217ENST00000624668 BDNFP23560 247 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 USP46P62068 366 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 CYP24A1Q07973 514 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 CUL4BQ13620 913 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 ZNF77Q15935 545 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 RESP18Q5W5W9 173 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 DGLUCYQ7Z3D6 616 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 CCDC127Q96BQ5 260 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 PCED1BQ96HM7 432 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 CGRRF1Q99675 332 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 POLR3BQ9NW08 1133 aaPredicted RBP16.62■□□□□ 0.25
ATRX-217ENST00000624668 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
ATRX-217ENST00000624668 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 LAMA1P25391 3075 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 UBE4BO95155 1302 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 PTPRDP23468 1912 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 ANAPC1Q9H1A4 1944 aa16.62■□□□□ 0.25
ATRX-217ENST00000624668 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
ATRX-217ENST00000624668 TRDMT1O14717 391 aaKnown RBP16.61■□□□□ 0.25
ATRX-217ENST00000624668 ME1P48163 572 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 CACNA2D1P54289 1103 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 ZXDBP98169 803 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 USP4Q13107 963 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATRX-217ENST00000624668 MTF1Q14872 753 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 BMT2Q1RMZ1 405 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 PRR23BQ6ZRT6 265 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 LONP2Q86WA8 852 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 SYNPOQ8N3V7 929 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
ATRX-217ENST00000624668 XXYLT1Q8NBI6 393 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
ATRX-217ENST00000624668 MMS19Q96T76 1030 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 MAGEF1Q9HAY2 307 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 WNT6Q9Y6F9 365 aa16.61■□□□□ 0.25
ATRX-217ENST00000624668 KLRC4O43908 158 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 EGFP01133 1207 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 CKMP06732 381 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 HOXA6P31267 233 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 AFMP43652 599 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 PXNP49023 591 aaPredicted RBP16.6■□□□□ 0.25
ATRX-217ENST00000624668 CASP4P49662 377 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 MYL6P60660 151 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 DNM1Q05193 864 aaKnown RBP16.6■□□□□ 0.25
ATRX-217ENST00000624668 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 SIM2Q14190 667 aaPredicted RBP16.6■□□□□ 0.25
ATRX-217ENST00000624668 LAIR1Q6GTX8 287 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 VSTM1Q6UX27 236 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 SPATA17Q96L03 361 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
ATRX-217ENST00000624668 GMEB2Q9UKD1 530 aa16.6■□□□□ 0.25
ATRX-217ENST00000624668 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
ATRX-217ENST00000624668 SPTBN2O15020 2390 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 TRAV19A0A0A6YYK7 116 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 ACTN4O43707 911 aaKnown RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 TACC1O75410 805 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 USP17L7P0C7H9 530 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 TNNI1P19237 187 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 GJA4P35212 333 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 GRIK1P39086 918 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 GALK1P51570 392 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 PDGFRLQ15198 375 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 EML3Q32P44 896 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 CC2D1AQ6P1N0 951 aaPredicted RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 GPR161Q8N6U8 529 aaKnown RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 OSCP1Q8WVF1 389 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 SECISBP2LQ93073 1101 aaKnown RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 ECT2Q9H8V3 914 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 DUS2Q9NX74 493 aaKnown RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 USP18Q9UMW8 372 aa16.59■□□□□ 0.25
ATRX-217ENST00000624668 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.59■□□□□ 0.25
ATRX-217ENST00000624668 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.24
ATRX-217ENST00000624668 F8VP50 259 aa16.58■□□□□ 0.24
ATRX-217ENST00000624668 RNF40O75150 1001 aa16.58■□□□□ 0.24
ATRX-217ENST00000624668 RETP07949 1114 aa16.58■□□□□ 0.24
ATRX-217ENST00000624668 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
ATRX-217ENST00000624668 ATXN1P54253 815 aaKnown RBP16.58■□□□□ 0.24
ATRX-217ENST00000624668 SNRPFP62306 86 aaKnown RBP16.58■□□□□ 0.24
ATRX-217ENST00000624668 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATRX-217ENST00000624668 STK4Q13043 487 aa16.58■□□□□ 0.24
ATRX-217ENST00000624668 KNOP1Q1ED39 458 aaKnown RBP16.58■□□□□ 0.24
ATRX-217ENST00000624668 WDR72Q3MJ13 1102 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms