RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PPARGC1AQ9UBK2 798 aaKnown RBP14.77□□□□□ -0.04
LDB3-209ENST00000623056 E7ESA3 106 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 SPECC1L-ADORA2AF8WAN1 911 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 SLC18A2Q05940 514 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 PTK7Q13308 1070 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 HNRNPDQ14103 355 aaKnown RBP14.77□□□□□ -0.05
LDB3-209ENST00000623056 AOC3Q16853 763 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 BBS9Q3SYG4 887 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 TMCO4Q5TGY1 634 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 SH2D5Q6ZV89 423 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 TRMT1LQ7Z2T5 733 aaKnown RBP14.77□□□□□ -0.05
LDB3-209ENST00000623056 MAP4K3Q8IVH8 894 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 SLC25A41Q8N5S1 370 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 TMEM161BQ8NDZ6 487 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 MTBPQ96DY7 904 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 VCPIP1Q96JH7 1222 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 FBXL18Q96ME1 805 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.05
LDB3-209ENST00000623056 TAGLN3Q9UI15 199 aa14.77□□□□□ -0.05
LDB3-209ENST00000623056 IQANK1A0A1B0GTG1 560 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 KLF11O14901 512 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 PABPC4LP0CB38 370 aaKnown RBP14.76□□□□□ -0.05
LDB3-209ENST00000623056 ITGB5P18084 799 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 GDF10P55107 478 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 DNAL1Q4LDG9 190 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 FAM102BQ5T8I3 360 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 TXNRD3NBQ6F5E7 133 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 TRIM72Q6ZMU5 477 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 USP37Q86T82 979 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 ABRAQ8N0Z2 381 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 TAB3Q8N5C8 712 aaPredicted RBP14.76□□□□□ -0.05
LDB3-209ENST00000623056 STKLD1Q8NE28 680 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 SLC35B2Q8TB61 432 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 NAT14Q8WUY8 206 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 MXRA8Q9BRK3 442 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 PARVAQ9NVD7 372 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 PCDHAC2Q9Y5I4 1007 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 TCRBV7S3A2A0A539 114 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 OPHN1O60890 802 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 PENKP01210 267 aaPredicted RBP14.76□□□□□ -0.05
LDB3-209ENST00000623056 ECE1P42892 770 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 STAT2P52630 851 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 ZNF252P-AS1Q0IIN9 211 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 FAAP100Q0VG06 881 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 TFDP3Q5H9I0 405 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 PRPF39Q86UA1 669 aaKnown RBP14.76□□□□□ -0.05
LDB3-209ENST00000623056 PDSS2Q86YH6 399 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 OR6Y1Q8NGX8 325 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDB3-209ENST00000623056 ZNRF3Q9ULT6 936 aa14.76□□□□□ -0.05
LDB3-209ENST00000623056 F8VP50 259 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 GH2P01242 217 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 HARSP12081 509 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 YWHABP31946 246 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 PTPN7P35236 360 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 GRIA2P42262 883 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 CDKN2BP42772 138 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 CRKP46108 304 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 QARSP47897 775 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 PSMC5P62195 406 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 MAP3K10Q02779 954 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 LMBRD2Q68DH5 695 aaPredicted RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 SPOPLQ6IQ16 392 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 RASSF3Q86WH2 238 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 ZNF516Q92618 1163 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 ZDHHC7Q9NXF8 308 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 SAE1Q9UBE0 346 aaPredicted RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 CHMP2BQ9UQN3 213 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 TMEM191CA6NGB0 347 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 A6NJR5 290 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 FKBP6O75344 327 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 TMEM63AO94886 807 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 TMEM191BP0C7N4 346 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 ACO1P21399 889 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 GNA15P30679 374 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 USP4Q13107 963 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 LRRC38Q5VT99 294 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 KYAT3Q6YP21 454 aaKnown RBP14.75□□□□□ -0.05
LDB3-209ENST00000623056 NME8Q8N427 588 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 SHKBP1Q8TBC3 707 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 FAM172AQ8WUF8 416 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 S100A14Q9HCY8 104 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 KCNH7Q9NS40 1196 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 TMCO1Q9UM00 188 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 IKBKGQ9Y6K9 419 aa14.75□□□□□ -0.05
LDB3-209ENST00000623056 I3L4J1 428 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 DHX15O43143 795 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 MMP10P09238 476 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 HOXA10P31260 410 aaPredicted RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 STIP1P31948 543 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 RPL22P35268 128 aaKnown RBP14.74□□□□□ -0.05
LDB3-209ENST00000623056 CCNFP41002 786 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 NPTX2P47972 431 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 RBM5P52756 815 aaKnown RBP eCLIP14.74□□□□□ -0.05
LDB3-209ENST00000623056 SPP2Q13103 211 aa14.74□□□□□ -0.05
LDB3-209ENST00000623056 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms