RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PLXNA3P51805 1871 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 MED7O43513 233 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 C1RP00736 705 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 CCDC130P13994 396 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 FECHP22830 423 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 ARPP19P56211 112 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 CDK17Q00537 523 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 LEXMQ3ZCV2 418 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 CFAP221Q4G0U5 840 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 PAQR9Q6ZVX9 377 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 CCDC186Q7Z3E2 898 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 ZNF461Q8TAF7 563 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 SLC2A14Q8TDB8 520 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 MSLNLQ96KJ4 702 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 SYT11Q9BT88 431 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 ABCB6Q9NP58 842 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 AFF4Q9UHB7 1163 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 PCDHGC3Q9UN70 934 aa21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.03■□□□□ 0.96
PDLIM2-221ENST00000622702 MTMR11A4FU01 709 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 KCNQ1P51787 676 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 CDR2Q01850 454 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 CCDC173Q0VFZ6 552 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 ANKRD54Q6NXT1 300 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 RNF19BQ6ZMZ0 732 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 SPATA2LQ8IUW3 424 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 SPPL2BQ8TCT7 592 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 ASB2Q96Q27 587 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 PPP1R9BQ96SB3 815 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 HAUS4Q9H6D7 363 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 ARHGAP20Q9P2F6 1191 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 TSPAN16Q9UKR8 245 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 MAFFQ9ULX9 164 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 PCDHB5Q9Y5E4 795 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 VCANP13611 3396 aa21.02■□□□□ 0.96
PDLIM2-221ENST00000622702 C5orf42Q9H799 3197 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 VNN2O95498 520 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 GLUD1P00367 558 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 SKILP12757 684 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ATF2P15336 505 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 CHRNB2P17787 502 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 CYP27A1Q02318 531 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 FAM35AQ86V20 835 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 SLC20A1Q8WUM9 679 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 AGPAT1Q99943 283 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ZNF518BQ9C0D4 1074 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 HSFX1Q9UBD0 423 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 CD207Q9UJ71 328 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ATP8B3O60423 1300 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 CLDN5O00501 218 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 TGM5O43548 720 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 MICAL2O94851 1124 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 SPATA31D3P0C874 917 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 MAGEA11P43364 429 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 FMO1Q01740 532 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 GOLGA7BQ2TAP0 167 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 PKDCCQ504Y2 493 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 TDRD12Q587J7 1177 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 LILRA6Q6PI73 481 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 SPATA31D4Q6ZUB0 917 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ZNF571Q7Z3V5 609 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ANKRD52Q8NB46 1076 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ATAD1Q8NBU5 361 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 SMARCD1Q96GM5 515 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 PGLYRP2Q96PD5 576 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 MED10Q9BTT4 135 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 APOL5Q9BWW9 433 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 ABI2Q9NYB9 513 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 HESX1Q9UBX0 185 aa21.01■□□□□ 0.95
PDLIM2-221ENST00000622702 PTPRDP23468 1912 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 SSU72P8A0A1W2PR75 194 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 MMEP08473 750 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 ANXA13P27216 316 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 ADORA2BP29275 332 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
PDLIM2-221ENST00000622702 TAF3Q5VWG9 929 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 PTCRAQ6ISU1 281 aaPredicted RBP21■□□□□ 0.95
PDLIM2-221ENST00000622702 SYCE2Q6PIF2 218 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 VSTM1Q6UX27 236 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 TTC30AQ86WT1 665 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 OLIG1Q8TAK6 271 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 LHX5Q9H2C1 402 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 MAN1C1Q9NR34 630 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 DZANK1Q9NVP4 752 aa21■□□□□ 0.95
PDLIM2-221ENST00000622702 SPDYE4A6NLX3 237 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 PLEKP08567 350 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 CFHP08603 1231 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 FAM200BP0CF97 657 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 HOXB8P17481 243 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 BDNFP23560 247 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 BCAT1P54687 386 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 ADCY1Q08828 1119 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 TRIM72Q6ZMU5 477 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 C12orf76Q8N812 135 aaPredicted RBP20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 CHP1Q99653 195 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 DUSP16Q9BY84 665 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 CRISPLD1Q9H336 500 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 CSNK1G1Q9HCP0 422 aa20.99■□□□□ 0.95
PDLIM2-221ENST00000622702 KRT82Q9NSB4 513 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms