RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 PHACTR2O75167 634 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 PTPN1P18031 435 aaKnown RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 MAGEA9P43362 315 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 KPNA1P52294 538 aaPredicted RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 MLLT6P55198 1093 aaPredicted RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 CSTF1Q05048 431 aaKnown RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 BIRC3Q13489 604 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 GAS6Q14393 721 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 MRPS31Q92665 395 aaKnown RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 CHFRQ96EP1 664 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 CHRDQ9H2X0 955 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 VRTNQ9H8Y1 702 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 GKN1Q9NS71 199 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 RBM12Q9NTZ6 932 aaKnown RBP20.61■□□□□ 0.89
LTBP4-239ENST00000622565 FBXO4Q9UKT5 387 aa20.61■□□□□ 0.89
LTBP4-239ENST00000622565 C2orf78A6NCI8 922 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 OTOL1A6NHN0 477 aaPredicted RBP20.6■□□□□ 0.89
LTBP4-239ENST00000622565 FAM163BP0C2L3 166 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 DDX6P26196 483 aaKnown RBP eCLIP20.6■□□□□ 0.89
LTBP4-239ENST00000622565 CTHP32929 405 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 AVPR1AP37288 418 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 GRIK1P39086 918 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 NCOA4Q13772 614 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 CEP135Q66GS9 1140 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 TRIM68Q6AZZ1 485 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 VSTM1Q6UX27 236 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 SPATA17Q96L03 361 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 FAM83CQ9BQN1 747 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 B3GNT5Q9BYG0 378 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 ZNF518BQ9C0D4 1074 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 C8orf33Q9H7E9 229 aaPredicted RBP20.6■□□□□ 0.89
LTBP4-239ENST00000622565 HPS4Q9NQG7 708 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 PRMT8Q9NR22 394 aaPredicted RBP20.6■□□□□ 0.89
LTBP4-239ENST00000622565 TDP1Q9NUW8 608 aa20.6■□□□□ 0.89
LTBP4-239ENST00000622565 UXTQ9UBK9 157 aaPredicted RBP20.6■□□□□ 0.89
LTBP4-239ENST00000622565 A8MXQ7 604 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 CLDN5O00501 218 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 AKAP3O75969 853 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 AP3M2P53677 418 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 KCNB1Q14721 858 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 MAPRE1Q15691 268 aaKnown RBP20.59■□□□□ 0.89
LTBP4-239ENST00000622565 ZNF699Q32M78 642 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 ZNF528Q3MIS6 628 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 ZACNQ401N2 412 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 SCARA5Q6ZMJ2 495 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 FMR1NBQ8N0W7 255 aaPredicted RBP20.59■□□□□ 0.89
LTBP4-239ENST00000622565 ADSSL1Q8N142 457 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 TMC2Q8TDI7 906 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 TRPC7Q9HCX4 862 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 GCNT4Q9P109 453 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 ZMYM5Q9UJ78 669 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 DENND4CQ5VZ89 1909 aa20.59■□□□□ 0.89
LTBP4-239ENST00000622565 SOBPA7XYQ1 873 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 F8VP50 259 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 CALUO43852 315 aaPredicted RBP20.58■□□□□ 0.89
LTBP4-239ENST00000622565 TDGF1P13385 188 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 PNOCQ13519 176 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 ZCWPW2Q504Y3 356 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 SPOPLQ6IQ16 392 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 PAQR9Q6ZVX9 377 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 SV2AQ7L0J3 742 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 SMYD4Q8IYR2 804 aaPredicted RBP20.58■□□□□ 0.89
LTBP4-239ENST00000622565 GUF1Q8N442 669 aaKnown RBP20.58■□□□□ 0.89
LTBP4-239ENST00000622565 ARL14EPQ8N8R7 260 aaPredicted RBP20.58■□□□□ 0.89
LTBP4-239ENST00000622565 B3GALNT2Q8NCR0 500 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 NELL1Q92832 810 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 C8orf48Q96LL4 319 aa20.58■□□□□ 0.89
LTBP4-239ENST00000622565 ARSAP15289 507 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 NR2F2P24468 414 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 ZXDBP98169 803 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 ZNF268Q14587 947 aaPredicted RBP20.57■□□□□ 0.88
LTBP4-239ENST00000622565 PON2Q15165 354 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 NFIL3Q16649 462 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 ZNF667Q5HYK9 610 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 Q6ZS52 159 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 DENND5BQ6ZUT9 1274 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 RALGPS2Q86X27 583 aaPredicted RBP20.57■□□□□ 0.88
LTBP4-239ENST00000622565 MSANTD3Q96H12 275 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 TTLL2Q9BWV7 592 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 EBF3Q9H4W6 596 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 KIF9Q9HAQ2 790 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■■■■ 57.6
LTBP4-239ENST00000622565 C2orf42Q9NWW7 574 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 THG1LQ9NWX6 298 aaKnown RBP20.57■□□□□ 0.88
LTBP4-239ENST00000622565 HMGXB4Q9UGU5 601 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 PTPRDP23468 1912 aa20.57■□□□□ 0.88
LTBP4-239ENST00000622565 LMNAP02545 664 aaKnown RBP20.56■□□□□ 0.88
LTBP4-239ENST00000622565 TRIM49P0CI25 452 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 TRIM49CP0CI26 452 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 HOXC13P31276 330 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 PPP3CAQ08209 521 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 ORC1Q13415 861 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 RUNX3Q13761 415 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 BECN1Q14457 450 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 ZNF77Q15935 545 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 ITPRIPL2Q3MIP1 535 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 SUMF1Q8NBK3 374 aa20.56■□□□□ 0.88
LTBP4-239ENST00000622565 ZBTB44Q8NCP5 570 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms