RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RSPO2Q6UXX9 243 aaPredicted RBP18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 MON1BQ7L1V2 547 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 ZNF653Q96CK0 615 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 SMARCD1Q96GM5 515 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 RHOBTB2Q9BYZ6 727 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 SYNCQ9H7C4 482 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 ST7Q9NRC1 585 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 YBX2Q9Y2T7 364 aaKnown RBP18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 BACE2Q9Y5Z0 518 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 CDY1Q9Y6F8 540 aa18.83■□□□□ 0.61
PTCHD3-202ENST00000622555 TULP2O00295 520 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 KRT86O43790 486 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 CAPN15O75808 1086 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 AP1G2O75843 785 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 ABL1P00519 1130 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 NPR3P17342 541 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 MMP8P22894 467 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 BDNFP23560 247 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 RGS19P49795 217 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 NFE2Q16621 373 aaPredicted RBP18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 SPRED2Q7Z698 418 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 FBXO22Q8NEZ5 403 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 AUTS2Q8WXX7 1259 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 TRIM11Q96F44 468 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 CPXM1Q96SM3 734 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 MRPL17Q9NRX2 175 aaKnown RBP18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 ABI2Q9NYB9 513 aaPredicted RBP18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 GUCA1BQ9UMX6 200 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.6
PTCHD3-202ENST00000622555 ATMINO43313 823 aaPredicted RBP18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 CALB1P05937 261 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 BMP8BP34820 402 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 PBX2P40425 430 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 RGS7P49802 495 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 GPC5P78333 572 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 PTPN20Q4JDL3 420 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 PMF1Q6P1K2 205 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 CLEC20AQ6ZU45 233 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 SLC35F5Q8WV83 523 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 VCPIP1Q96JH7 1222 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 PGLYRP2Q96PD5 576 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 TGS1Q96RS0 853 aaKnown RBP18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 ALG13Q9NP73 1137 aaKnown RBP18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 MSRAQ9UJ68 235 aa18.82■□□□□ 0.6
PTCHD3-202ENST00000622555 XPO1O14980 1071 aaKnown RBP18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 ADAM12O43184 909 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 BEST1O76090 585 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 MYBL1P10243 752 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 OR1D2P34982 312 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 CA8P35219 290 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 MAP3K7CLP57077 242 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 PTP4A2Q12974 167 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 GPR17Q13304 367 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 LIN9Q5TKA1 542 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 SLC8B1Q6J4K2 584 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 PHLDB2Q86SQ0 1253 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 IPO4Q8TEX9 1081 aaKnown RBP18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 MYO1AQ9UBC5 1043 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 CNOT8Q9UFF9 292 aaKnown RBP18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 LZTS1Q9Y250 596 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 PCDHB5Q9Y5E4 795 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 NCANO14594 1321 aa18.81■□□□□ 0.6
PTCHD3-202ENST00000622555 MACROD2A1Z1Q3 448 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 C5orf67F2Z3F1 127 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CTSAP10619 480 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PLA2G4AP47712 749 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 TAP1Q03518 808 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 RAB30Q15771 203 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 DNTTIP2Q5QJE6 756 aaKnown RBP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CYP4A22Q5TCH4 519 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 TDHQ8IZJ6 230 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 STK32AQ8WU08 396 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 FUBP3Q96I24 572 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 SAMD11Q96NU1 681 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 SMOQ99835 787 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 C11orf84Q9BUA3 381 aaPredicted RBP18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 TJP2Q9UDY2 1190 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 SSX2IPQ9Y2D8 614 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PIK3R2O00459 728 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 ERBB2P04626 1255 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CYP1A2P05177 515 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 RB1P06400 928 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 RRM1P23921 792 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CYP2F1P24903 491 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 ROR1Q01973 937 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 SMARCB1Q12824 385 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 CFAP221Q4G0U5 840 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 RNF19BQ6ZMZ0 732 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 TMC7Q7Z402 723 aa18.8■□□□□ 0.6
PTCHD3-202ENST00000622555 PIGZQ86VD9 579 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms