RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 SLC1A5Q15758 541 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 TRIM16LQ309B1 348 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 ARSHQ5FYA8 562 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 MDH1BQ5I0G3 518 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 TTC27Q6P3X3 843 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 TRABD2AQ86V40 505 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GOLM1Q8NBJ4 401 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 HIPK4Q8NE63 616 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GSTCDQ8NEC7 633 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 TNIP2Q8NFZ5 429 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 SLC35G2Q8TBE7 412 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 DCUN1D5Q9BTE7 237 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 UNKQ9C0B0 810 aaKnown RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 SMYD3Q9H7B4 428 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 C10orf88Q9H8K7 445 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 NINJ2Q9NZG7 142 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 WHRNQ9P202 907 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 PCDHB2Q9Y5E7 798 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 C19orf81C9J6K1 198 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 C6orf222P0C671 652 aaPredicted RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 OASLQ15646 514 aaKnown RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 EDRF1Q3B7T1 1238 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 KAZNQ674X7 775 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 AADACL2Q6P093 401 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 AMIGO2Q86SJ2 522 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 MCF2L2Q86YR7 1114 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GUF1Q8N442 669 aaKnown RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 OR7G1Q8NGA0 311 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 TNFRSF25Q93038 417 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 OXNAD1Q96HP4 312 aaPredicted RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 FANCFQ9NPI8 374 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 SENP1Q9P0U3 644 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 KANSL3Q9P2N6 904 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GRID1Q9ULK0 1009 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 MYOCOSA0A1B0GUC4 107 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 CYP26A1O43174 497 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ATMINO43313 823 aaPredicted RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 AQP9O43315 295 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 SIN3BO75182 1162 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 SLC4A1P02730 911 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 CYP19A1P11511 503 aaPredicted RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 ITIH2P19823 946 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 PRKACBP22694 351 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 HOXC13P31276 330 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 GPC3P51654 580 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 YWHAGP61981 247 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS11-209ENST00000622309 FKBP3Q00688 224 aaKnown RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 CD300CQ08708 224 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ARHGEF6Q15052 776 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 SF3B4Q15427 424 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS11-209ENST00000622309 IRF2BP2Q7Z5L9 587 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 TTC7BQ86TV6 843 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 GRAMD2AQ8IUY3 354 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 RHOT2Q8IXI1 618 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ZBTB38Q8NAP3 1195 aaPredicted RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 CHPT1Q8WUD6 406 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 RFFLQ8WZ73 363 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 HPS1Q92902 700 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 CTRCQ99895 268 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 FERMT1Q9BQL6 677 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 TSSK1BQ9BXA7 367 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 KANSL2Q9H9L4 492 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 SIAEQ9HAT2 523 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 AAASQ9NRG9 546 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 DCAF16Q9NXF7 216 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 KCTD5Q9NXV2 234 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 IGSF9Q9P2J2 1179 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 MOSPD1Q9UJG1 213 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ZNF652Q9Y2D9 606 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 INPP5FQ9Y2H2 1132 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 NID2Q14112 1375 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 XPO1O14980 1071 aaKnown RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 PEX1O43933 1283 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 GGPS1O95749 300 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 IL33O95760 270 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 GLULP15104 373 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 TSPAN7P41732 249 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 RPS3AP61247 264 aaKnown RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 PSMD6Q15008 389 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 Q3C1V9 767 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 TMTC4Q5T4D3 741 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 CYP4F22Q6NT55 531 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 LRRC55Q6ZSA7 311 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 FAM20CQ8IXL6 584 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 LZTR1Q8N653 840 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ACTRT2Q8TDY3 377 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 NAP1L4Q99733 375 aaKnown RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 MAN1C1Q9NR34 630 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 PPARGC1AQ9UBK2 798 aaKnown RBP8.25□□□□□ -1.09
VPS11-209ENST00000622309 KLHL3Q9UH77 587 aa8.25□□□□□ -1.09
VPS11-209ENST00000622309 ANAPC5Q9UJX4 755 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms