RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 NAP1L4Q99733 375 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 SORBS1Q9BX66 1292 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 TEX101Q9BY14 249 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 CXorf36Q9H7Y0 433 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 CA14Q9ULX7 337 aa5.78□□□□□ -1.48
CPNE3-213ENST00000622183 MTO1Q9Y2Z2 717 aaKnown RBP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.78□□□□□ -1.48
CPNE3-213ENST00000622183 MARCH11A6NNE9 402 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 hCG_1984214I3L0E3 225 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 M0R3H8 397 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 COQ9O75208 318 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 ERN1O75460 977 aaKnown RBP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 RPS6KA4O75676 772 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 SCAF4O95104 1147 aaKnown RBP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 GLP2RO95838 553 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 ITGB3P05106 788 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 CFIP05156 583 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 ELANEP08246 267 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 SLC5A2P31639 672 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 NDUFV1P49821 464 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 NSUN2Q08J23 767 aaKnown RBP eCLIP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 CRHR2Q13324 411 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 POSTNQ15063 836 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 ALFQ53S48 1182 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 MANEALQ5VSG8 457 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 LIN54Q6MZP7 749 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 JMJD6Q6NYC1 403 aaPredicted RBP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 GATAD2AQ86YP4 633 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 ADGRG5Q8IZF4 528 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 STT3BQ8TCJ2 826 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 PPP2R3CQ969Q6 453 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 FAM227BQ96M60 508 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 KATNAL1Q9BW62 490 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 TRIM5Q9C035 493 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 MAF1Q9H063 256 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 TRPM5Q9NZQ8 1165 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 PGAP2Q9UHJ9 254 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 SORCS3Q9UPU3 1222 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 HPSEQ9Y251 543 aa5.77□□□□□ -1.49
CPNE3-213ENST00000622183 MRPS17Q9Y2R5 130 aaKnown RBP5.77□□□□□ -1.49
CPNE3-213ENST00000622183 GAGE12BA1L429 117 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 MYADML2A6NDP7 307 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 RGS10O43665 173 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 ASNA1O43681 348 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 TNFRSF6BO95407 300 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 HLA-DOAP06340 250 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 PECAM1P16284 738 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 NPPBP16860 134 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 PRKAG1P54619 331 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 ARL4CP56559 192 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 RPS7P62081 194 aaKnown RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 CXADRP78310 365 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 ICAM4Q14773 271 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 B3GNTL1Q67FW5 361 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 SFRP4Q6FHJ7 346 aaPredicted RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 RFX8Q6ZV50 586 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 MICALCLQ6ZW33 695 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 SPARTQ8N0X7 666 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 GALNT15Q8N3T1 639 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 TMEM132CQ8N3T6 1108 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 CPT1CQ8TCG5 803 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 SNX19Q92543 992 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 PRPF18Q99633 342 aaKnown RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 CD248Q9HCU0 757 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 TMOD4Q9NZQ9 345 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 NDRG4Q9ULP0 352 aaKnown RBP5.76□□□□□ -1.49
CPNE3-213ENST00000622183 DTNAQ9Y4J8 743 aa5.76□□□□□ -1.49
CPNE3-213ENST00000622183 CD3EAPO15446 510 aaKnown RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ZFPL1O95159 310 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ITGA2BP08514 1039 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 CD6P30203 668 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 NPTX2P47972 431 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 POLE2P56282 527 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 TOB2Q14106 344 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 TRIM71Q2Q1W2 868 aaKnown RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 PTCHD3Q3KNS1 767 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 PREPLQ4J6C6 727 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 RABL3Q5HYI8 236 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 RBM20Q5T481 1227 aaKnown RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 CERCAMQ5T4B2 595 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 FAM9AQ8IZU1 332 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 FAM109AQ8N4B1 249 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 DNAJB14Q8TBM8 379 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ZDHHC12Q96GR4 267 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 BOD1Q96IK1 185 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ZNF668Q96K58 619 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 OSBPL9Q96SU4 736 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ADOQ96SZ5 270 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 SLC25A32Q9H2D1 315 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 ITM2CQ9NQX7 267 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 AURKAIP1Q9NWT8 199 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 DNAJB11Q9UBS4 358 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms